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  5. Pnu_g06397

Pnu_g06397 (UPS5, ATUPS5)


Aliases : UPS5, ATUPS5

Description : nucleobase cation transporter *(UPS) & original description: none


Gene families : OG0003059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06397
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G26440 UPS5, ATUPS5 ureide permease 5 0.03 OrthoFinder output from all 47 species
AT2G03520 UPS4, ATUPS4 ureide permease 4 0.03 OrthoFinder output from all 47 species
AT2G03600 ATUPS3, UPS3 ureide permease 3 0.02 OrthoFinder output from all 47 species
Ceric.12G033300.1 UPS1, ATUPS1,... nucleobase cation transporter *(UPS) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12153 UPS1, ATUPS1 nucleobase cation transporter *(UPS) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_03220 UPS1, ATUPS1 nucleobase cation transporter (UPS) 0.03 OrthoFinder output from all 47 species
LOC_Os12g31860.1 UPS5, ATUPS5,... nucleobase cation transporter (UPS) 0.03 OrthoFinder output from all 47 species
Mp1g00600.1 UPS1, ATUPS1 nucleobase cation transporter (UPS) 0.04 OrthoFinder output from all 47 species
Ore_g07186 UPS1, ATUPS1 nucleobase cation transporter *(UPS) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0071705 nitrogen compound transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR009834 Ureide_permease 41 424
No external refs found!