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  5. Pnu_g06172

Pnu_g06172


Description : protein involved in PS-I assembly *(PYG7) & original description: none


Gene families : OG0005614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00138060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Ceric.03G019100.1 Ceric.03G019100 not classified & original description: pacid=50572267... 0.07 OrthoFinder output from all 47 species
Cre12.g524300 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dcu_g08751 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01034503001 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
LOC_Os10g32300.1 LOC_Os10g32300 PYG7 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species
Lfl_g10429 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Mp2g07550.1 No alias PYG7 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Ppi_g15480 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
Smo90520 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Zm00001e034869_P002 Zm00001e034869 PYG7 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!