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  5. Pnu_g05836

Pnu_g05836 (PTB3)


Aliases : PTB3

Description : not classified & original description: none


Gene families : OG0002613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05836
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00061780 PTB3,... Polypyrimidine tract-binding protein homolog 3... 0.03 OrthoFinder output from all 47 species
AT1G43190 PTB3 polypyrimidine tract-binding protein 3 0.03 OrthoFinder output from all 47 species
Als_g07535 PTB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09792 PTB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03792 PTB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 397 462
IPR021790 PTBP1-like_RRM2 103 180
No external refs found!