1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g05745

Pnu_g05745


Description : splicing factor *(SR45a) & original description: none


Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05745
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT1G07350 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g079305 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08659 No alias splicing factor *(SR45a) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36979 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56006 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 42 111
No external refs found!