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  5. Pnu_g05680

Pnu_g05680


Description : plastidial RNA exonuclease & original description: none


Gene families : OG0006778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05680
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g65400.2 LOC_Os01g65400 plastidial exonuclease 0.02 OrthoFinder output from all 47 species
Lfl_g35691 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39074 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 289 369
IPR020046 5-3_exonucl_a-hlix_arch_N 129 258
No external refs found!