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  5. Pnu_g04439

Pnu_g04439 (ARF10)


Aliases : ARF10

Description : not classified & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g04439

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00110140 ARF4 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00141830 HSS, ARF1-BP,... RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
AT4G23980 ARF9 auxin response factor 9 0.03 OrthoFinder output from all 47 species
Adi_g011925 ARF6 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058500 ARF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088539 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08441 ARF10 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33060 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33091 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57848 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59651 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05880.t1 ARF19, IAA22,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26636.t1 ARF16, Aspi01Gene26636 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010679 ARF1 ARF-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0065.g035933 ARF6 not classified & original description: CDS=1-678 0.05 OrthoFinder output from all 47 species
Cba_g07702 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015035001 ARF19, IAA22, ARF11 RNA biosynthesis.transcriptional activation.B3... 0.05 OrthoFinder output from all 47 species
Gb_32404 ARF4 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
LOC_Os02g35140.1 ARF1, LOC_Os02g35140 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g36054.1 ARF1, LOC_Os04g36054 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g56850.1 MP, IAA24, ARF5,... transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g46410.1 ARF6, LOC_Os06g46410 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47150.1 ARF16, LOC_Os06g47150 transcription factor (ARF) 0.05 OrthoFinder output from all 47 species
Len_g29145 ARF1 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04470 ARF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19283 ARF4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29226 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000212 ARF4 not classified & original description: CDS=1-1212 0.02 OrthoFinder output from all 47 species
Solyc01g096070.3.1 ARF9, Solyc01g096070 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Solyc03g031970.4.1 ARF8, ATARF8,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Spa_g12615 ARF16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51847 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006640_P002 MP, IAA24, ARF5,... transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Zm00001e018761_P001 HSS, ARF1-BP,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e020205_P004 ARF3, ETT, Zm00001e020205 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e025163_P001 ARF6, Zm00001e025163 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e041910_P003 ARF8, ATARF8,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!