Pnu_g03825


Description : C2H2 subclass ZFP transcription factor & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g03825

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00139230 RAB, RBE,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Adi_g024673 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g058301 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g11899 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g23609 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15614.t1 Aspi01Gene15614 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32976.t1 Aspi01Gene32976 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51187.t1 ZFP6, Aspi01Gene51187 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68785.t1 Aspi01Gene68785 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g27985 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g27986 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01027720001 SUP, FLO10, FON1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_16852 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_27734 ZFP10, ATZFP10 Zinc finger protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40300.1 ZFP7, LOC_Os07g40300 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g49598 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000637 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005130.2.1 ZFP4, Solyc01g005130 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc09g061870.3.1 Solyc09g061870 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!