MA_401848g0010


Description : 16.8.2.1 secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. TRANSPARENT TESTA 4 (TT4)


Gene families : OG_01_0001364 (Gene family) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_401848g0010
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010589001 No alias 16.8.2.1 secondary... 0.02 Gene family
GSVIVT01010590001 No alias 16.8.2.1 secondary... 0.02 Gene family
GSVIVT01032968001 No alias 16.8.2.1 secondary... 0.05 Gene family
MA_10426264g0020 No alias 16.8.2.1 secondary... 0.04 Gene family
MA_5735g0010 No alias 16.8.2.1 secondary... 0.03 Gene family
Smo270496 PACid_15420434 No description available 0.02 Gene family
Solyc09g091510.3.1 Solyc09g091510.3 16.8.2.1 secondary... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synthase_N 42 201
IPR001099 Chalcone/stilbene_synthase_N 206 242
IPR012328 Chalcone/stilbene_synth_C 253 402
No external refs found!