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  5. Pnu_g01329

Pnu_g01329


Description : symbiosis factor *(VAPYRIN) & original description: none


Gene families : OG0002418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01329
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Aev_g21071 No alias symbiosis factor *(VAPYRIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02026 No alias symbiosis factor *(VAPYRIN) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g081500.1.1 Solyc10g081500 symbiosis factor (VAPYRIN) 0.02 OrthoFinder output from all 47 species
Zm00001e005230_P001 Zm00001e005230 symbiosis factor (VAPYRIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 145 224
IPR002110 Ankyrin_rpt 412 470
IPR002110 Ankyrin_rpt 228 289
IPR002110 Ankyrin_rpt 355 402
IPR000535 MSP_dom 19 93
No external refs found!