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  5. Pnu_g00858

Pnu_g00858


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g00858
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G77580 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
Aev_g28198 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14016 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49569 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02379 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31008 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04613 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08748 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10655 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36293 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48635.t1 Aspi01Gene48635 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59234.t2 Aspi01Gene59234 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59235.t1 Aspi01Gene59235 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037431 No alias not classified & original description: CDS=151-3552 0.04 OrthoFinder output from all 47 species
Ceric.15G059400.1 Ceric.15G059400 not classified & original description: pacid=50639568... 0.03 OrthoFinder output from all 47 species
Ceric.27G014900.1 Ceric.27G014900 not classified & original description: pacid=50605858... 0.03 OrthoFinder output from all 47 species
Dac_g04287 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20369 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39506 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g20920.1 No alias Exocyst complex recruiting factor (VETH) 0.04 OrthoFinder output from all 47 species
Msp_g15091 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02317 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11825 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12619 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08462 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g30136 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09435 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 60 1022
No external refs found!