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  5. Pnu_g00830

Pnu_g00830


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g00830

Target Alias Description ECC score Gene Family Method Actions
AT3G62630 No alias Protein of unknown function (DUF1645) 0.02 OrthoFinder output from all 47 species
Als_g50503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_487195g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g14398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 127 456
No external refs found!