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  5. Pnu_g00734

Pnu_g00734 (GMD1)


Aliases : GMD1

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g00734
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G66280 GMD1 GDP-D-mannose 4,6-dehydratase 1 0.03 OrthoFinder output from all 47 species
Aev_g16780 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27170 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g21830.1 GMD1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species
Smo99252 GMD1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 323
No external refs found!