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  5. Gb_09032

Gb_09032


Description : DNA-directed RNA polymerase subunit beta OS=Pinus koraiensis (sp|q85x62|rpoc2_pinko : 654.0)


Gene families : OG_01_0000707 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000707_tree ,
OG_02_0001017 (LandPlants) Phylogenetic Tree(s): OG_02_0001017_tree ,
OG_03_0000818 (SeedPlants) Phylogenetic Tree(s): OG_03_0000818_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09032
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.05 Archaeplastida
ATCG00180 RPOC1 DNA-directed RNA polymerase family protein 0.05 Archaeplastida
GSVIVT01019173001 No alias DNA-directed RNA polymerase subunit beta OS=Vitis vinifera 0.06 Archaeplastida
LOC_Os02g24614.1 No alias RpoC1 core component plastid-encoded RNA polymerase 0.07 Archaeplastida
LOC_Os04g16830.1 No alias DNA-directed RNA polymerase subunit beta OS=Oryza sativa... 0.06 Archaeplastida
Mp1g00060.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.1 Archaeplastida
Mp4g02290.1 No alias DNA-directed RNA polymerase subunit beta OS=Marchantia... 0.05 Archaeplastida
Mp4g05220.1 No alias No annotation 0.03 Archaeplastida
Mp5g11220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc00g500052.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 Archaeplastida
Solyc00g500135.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 Archaeplastida
Solyc00g500205.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 Archaeplastida
Solyc00g500290.1.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.05 Archaeplastida
Solyc01g017370.2.1 No alias DNA-directed RNA polymerase subunit beta OS=Nicotiana... 0.13 Archaeplastida
Solyc01g017470.3.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.08 Archaeplastida
Solyc11g062110.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Nicotiana... 0.08 Archaeplastida
Solyc12g062580.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.09 Archaeplastida
Zm00001e042060_P001 No alias RpoC2 core component plastid-encoded RNA polymerase 0.04 Archaeplastida
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.05 LandPlants
GSVIVT01019173001 No alias DNA-directed RNA polymerase subunit beta OS=Vitis vinifera 0.06 LandPlants
LOC_Os04g16830.1 No alias DNA-directed RNA polymerase subunit beta OS=Oryza sativa... 0.06 LandPlants
Mp1g00060.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.1 LandPlants
Mp4g05220.1 No alias No annotation 0.03 LandPlants
Solyc00g500052.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 LandPlants
Solyc00g500135.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 LandPlants
Solyc00g500205.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 LandPlants
Solyc00g500290.1.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.04 LandPlants
Solyc08g028940.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.02 LandPlants
Zm00001e042060_P001 No alias RpoC2 core component plastid-encoded RNA polymerase 0.04 LandPlants
AMTR_s00028p00130230 evm_27.TU.AmTr_v1... DNA-directed RNA polymerase subunit beta OS=Amborella trichopoda 0.01 SeedPlants
AMTR_s00390p00012910 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.01 SeedPlants
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.05 SeedPlants
GSVIVT01019173001 No alias DNA-directed RNA polymerase subunit beta OS=Vitis vinifera 0.06 SeedPlants
LOC_Os04g16830.1 No alias DNA-directed RNA polymerase subunit beta OS=Oryza sativa... 0.06 SeedPlants
Solyc00g500052.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 SeedPlants
Solyc00g500135.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 SeedPlants
Solyc00g500205.1.1 No alias RpoC1 core component plastid-encoded RNA polymerase.... 0.08 SeedPlants
Solyc00g500290.1.1 No alias RpoC2 core component plastid-encoded RNA polymerase 0.04 SeedPlants
Solyc08g028940.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.02 SeedPlants
Solyc10g011720.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Solanum... 0.01 SeedPlants
Zm00001e042060_P001 No alias RpoC2 core component plastid-encoded RNA polymerase 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!