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Aliases : UPL2
Description : not classified & original description: none
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00211330 | UPL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00204480 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g049236 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g060512 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g076223 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077941 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087677 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04900 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16628 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06863 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16302 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27017 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene08880.t2 | UPL2, Aspi01Gene08880 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042300 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046399 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g36312 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G011900.1 | UPL1, Ceric.29G011900 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12771 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21858 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014697001 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21632 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26784 | UPL2 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23822 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_20049g0010 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| MA_7295g0020 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g21620.1 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13587 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g15570 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06511 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40576 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g065630.4.1 | UPL1, Solyc07g065630 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g17792 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29717 | UPL1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g33388 | UPL2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g40173 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g52454 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017836_P002 | UPL1, Zm00001e017836 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039654_P001 | UPL1, Zm00001e039654 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |