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  5. Lfl_g40458

Lfl_g40458


Description : not classified & original description: none


Gene families : OG0002772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40458

Target Alias Description ECC score Gene Family Method Actions
Adi_g013016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013175 No alias not classified & original description: CDS=68-2116 0.03 OrthoFinder output from all 47 species
Spa_g10302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029479 Nitroreductase 234 362
No external refs found!