Lfl_g40402


Description : regulatory component *(PP4R3) of PP4 phosphatase complex & original description: none


Gene families : OG0002351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002351_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40402

Target Alias Description ECC score Gene Family Method Actions
AT3G06670 No alias binding 0.05 OrthoFinder output from all 47 species
Adi_g020060 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Aev_g08027 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Aev_g17450 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 OrthoFinder output from all 47 species
Ala_g12717 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.08 OrthoFinder output from all 47 species
Als_g14683 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.1 OrthoFinder output from all 47 species
Aob_g13929 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25382.t1 Aspi01Gene25382 regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Cba_g21800 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Cba_g58304 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Ceric.06G000800.1 Ceric.06G000800 regulatory component *(PP4R3) of PP4 phosphatase complex... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.7 No alias Protein modification.dephosphorylation.serine/threonine... 0.01 OrthoFinder output from all 47 species
Dac_g15405 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Dcu_g15371 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.09 OrthoFinder output from all 47 species
GSVIVT01035021001 No alias Protein modification.dephosphorylation.serine/threonine... 0.09 OrthoFinder output from all 47 species
LOC_Os01g23590.1 LOC_Os01g23590 regulatory component PP4R3 of PP4 phosphatase complex 0.05 OrthoFinder output from all 47 species
LOC_Os05g06470.1 LOC_Os05g06470 regulatory component PP4R3 of PP4 phosphatase complex 0.05 OrthoFinder output from all 47 species
MA_10434947g0010 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.02 OrthoFinder output from all 47 species
MA_10695g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g09510.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.03 OrthoFinder output from all 47 species
Ore_g18327 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Ore_g25702 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Ppi_g04690 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Sam_g18621 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Sam_g24466 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Smo416323 No alias Protein modification.dephosphorylation.serine/threonine... 0.06 OrthoFinder output from all 47 species
Solyc01g060080.4.1 Solyc01g060080 regulatory component PP4R3 of PP4 phosphatase complex 0.04 OrthoFinder output from all 47 species
Solyc12g099320.2.1 Solyc12g099320 regulatory component PP4R3 of PP4 phosphatase complex 0.06 OrthoFinder output from all 47 species
Spa_g41739 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Spa_g47196 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Zm00001e017588_P001 Zm00001e017588 regulatory component PP4R3 of PP4 phosphatase complex 0.08 OrthoFinder output from all 47 species
Zm00001e026266_P001 Zm00001e026266 regulatory component PP4R3 of PP4 phosphatase complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006887 P4R3-like_central_dom 182 369
No external refs found!