Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g38888 | |
Cluster | HCCA: Cluster_139 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00179170 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT2G37600 | No alias | Ribosomal protein L36e family protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G53740 | No alias | Ribosomal protein L36e family protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G02450 | No alias | Ribosomal protein L36e family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g067485 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g16043 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g32159 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0049.g030800 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021493.69 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g484050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g01113 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g17175 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028917001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g62350.1 | LOC_Os01g62350 | component RPL36 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g38520.1 | LOC_Os05g38520 | component RPL36 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
MA_10430792g0010 | No alias | component RPL36 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Mp1g05460.1 | No alias | component RPL36 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Pp3c14_19960V3.1 | Pp3c14_19960 | Ribosomal protein L36e family protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_32310V3.1 | Pp3c1_32310 | Ribosomal protein L36e family protein | 0.05 | OrthoFinder output from all 47 species | |
Sam_g07231 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g23436 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g23546 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g31192 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Smo267958 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Smo439710 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g025520.4.1 | Solyc03g025520 | component RPL36 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Spa_g03176 | No alias | component *(eL36) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027238_P001 | Zm00001e027238 | component RPL36 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031832_P002 | Zm00001e031832 | component RPL36 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0017182 | peptidyl-diphthamide metabolic process | IEP | HCCA |
BP | GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018202 | peptidyl-histidine modification | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0045048 | protein insertion into ER membrane | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0090560 | 2-(3-amino-3-carboxypropyl)histidine synthase activity | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1900247 | regulation of cytoplasmic translational elongation | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000509 | Ribosomal_L36e | 42 | 135 |
No external refs found! |