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  5. Cba_g79067

Cba_g79067 (UBQ11)


Aliases : UBQ11

Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g79067

Target Alias Description ECC score Gene Family Method Actions
AT4G05050 UBQ11 ubiquitin 11 0.02 OrthoFinder output from all 47 species
Aev_g40141 UBQ10 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08097 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30978 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33040 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.07 OrthoFinder output from all 47 species
Als_g33943 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49628 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58520 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59298 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32072 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36739 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15129.t1 UBQ11, Aspi01Gene15129 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18515.t1 UBQ11, Aspi01Gene18515 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18516.t1 UBQ11, Aspi01Gene18516 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18517.t1 UBQ11, Aspi01Gene18517 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20737.t1 UBQ11, Aspi01Gene20737 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57837.t1 UBQ10, Aspi01Gene57837 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29654 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34959 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.03G010600.1 UBQ14, Ceric.03G010600 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.12G071200.1 UBQ14, Ceric.12G071200 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.12G071800.1 UBQ11, Ceric.12G071800 UBQ ubiquitin-fold protein & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.1Z299200.1 UBQ3, Ceric.1Z299200 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G037800.1 UBQ3, Ceric.29G037800 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G037900.1 UBQ3, Ceric.29G037900 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G038000.1 UBQ3, Ceric.29G038000 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g26865 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51446 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29490 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00973 UBQ11 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g53620.1 UBQ4, LOC_Os04g53620 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
LOC_Os08g08700.1 LOC_Os08g08700 Polyubiquitin 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g29367 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36572 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g23411 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
MA_20231g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
MA_4040g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
MA_5869456g0010 UBQ11 Polyubiquitin 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_702665g0010 No alias Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_9401507g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
Msp_g12013 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17628 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18242 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23240 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23785 RUB1, ATRUB1, NEDD8 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32858 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pnu_g16415 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05460 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g27503 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35753 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48171 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55284 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26881 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo271198 UBQ4 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Solyc06g053210.4.1 Solyc06g053210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009126_P001 UBQ11, Zm00001e009126 Polyubiquitin (Fragment) OS=Acetabularia peniculus... 0.02 OrthoFinder output from all 47 species
Zm00001e010317_P001 Zm00001e010317 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035030_P001 Zm00001e035030 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 79 136
No external refs found!