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  5. Cba_g77215

Cba_g77215


Description : not classified & original description: none


Gene families : OG0001805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001805_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g77215
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00134040 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G17580 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Adi_g027067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67442.t1 Aspi01Gene67442 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026292 No alias not classified & original description: CDS=427-624 0.01 OrthoFinder output from all 47 species
Ceric.17G056300.1 Ceric.17G056300 not classified & original description: pacid=50618383... 0.06 OrthoFinder output from all 47 species
Ceric.21G038800.1 Ceric.21G038800 not classified & original description: pacid=50604262... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04680.1 LOC_Os05g04680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011985_P001 Zm00001e011985 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!