1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g38370

Lfl_g38370


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g38370

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10892 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g11538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t1 Aspi01Gene16465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0310.g064128 No alias not classified & original description: CDS=310-1077 0.03 OrthoFinder output from all 47 species
Cba_g34321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G007800.1 Ceric.07G007800 not classified & original description: pacid=50627820... 0.04 OrthoFinder output from all 47 species
Dcu_g43310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g22380.1 LOC_Os04g22380 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Len_g13416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Msp_g31463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011272 No alias not classified & original description: CDS=1-360 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012608 No alias not classified & original description: CDS=342-1457 0.05 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc03g025390.3.1 Solyc03g025390 component Tic32 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Spa_g25270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 36 176
No external refs found!