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Aliases : MUR10, ATCESA7, CESA7, IRX3
Description : not classified & original description: none
Gene families : OG0003485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003485_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g75768 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g011566 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086874 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g096899 | CESA6, PRC1, IXR2, E112 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g49552 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g63205 | CESA6, PRC1, IXR2, E112 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432969g0020 | AtCESA1, RSW1, CESA1 | Cellulose synthase A catalytic subunit 1 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435639g0010 | ATH-A, CESA2, ATCESA2 | Probable cellulose synthase A catalytic subunit 5... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03533 | CESA6, PRC1, IXR2, E112 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18052 | CESA6, PRC1, IXR2, E112 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25696 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19332 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018941 | AtCESA1, RSW1, CESA1 | not classified & original description: CDS=272-652 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14462 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22139 | CESA5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38394 | ATH-A, CESA2, ATCESA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027934 | CES_Znf_RING | 19 | 95 |
| No external refs found! |