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  5. Cba_g74107

Cba_g74107


Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g74107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G14230 RAP2.2 related to AP2 2 0.04 OrthoFinder output from all 47 species
Adi_g001999 HRE1 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g05911 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g06485 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g07933 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g16147 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g18227 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Als_g25437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33217 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01047.t1 Aspi01Gene01047 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02047.t1 ATERF-9, ERF9,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene03168.t1 Aspi01Gene03168 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47265.t1 TINY2, Aspi01Gene47265 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49723.t1 HRE2, Aspi01Gene49723 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49729.t1 HRE2, Aspi01Gene49729 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49730.t1 HRE2, Aspi01Gene49730 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04602 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05445 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g12384 DEAR1, CEJ1, ATERF#011 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01013913001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01014291001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01022076001 DEAR3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01032961001 LEP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.09 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_08031 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_09495 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Gb_19221 DEAR3 Ethylene-responsive transcription factor ERF008... 0.03 OrthoFinder output from all 47 species
Gb_24048 HRE2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_24326 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_24328 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_24329 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26738 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26855 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26858 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26863 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.02 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09810.1 LOC_Os06g09810 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.04 OrthoFinder output from all 47 species
MA_10343854g0010 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10370681g0010 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_364562g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_484878g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_5629699g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp4g00380.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g06970.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Ore_g23306 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08267 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32668 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g27989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29088 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30473 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e007205_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1E... 0.02 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 51 94
No external refs found!