Cba_g74059


Description : component *(uL29) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g74059

Target Alias Description ECC score Gene Family Method Actions
AT2G39390 No alias Ribosomal L29 family protein 0.04 OrthoFinder output from all 47 species
AT3G09500 No alias Ribosomal L29 family protein 0.05 OrthoFinder output from all 47 species
AT3G55170 No alias Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
AT5G02610 No alias Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Adi_g129877 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ala_g18235 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g24513 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Aop_g17159 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g23213 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g24019 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g68030 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g77930 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.10G004300.1 Ceric.10G004300 component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.39G045700.1 Ceric.39G045700 component *(uL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.79 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g01910 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g13562 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dde_g45940 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_01009 No alias component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Gb_33813 No alias component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pir_g03536 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g52838 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c13_5200V3.1 Pp3c13_5200 Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Pp3c3_2800V3.1 Pp3c3_2800 Ribosomal L29 family protein 0.04 OrthoFinder output from all 47 species
Ppi_g33963 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g05972 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36756 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g37983 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g38887 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo438324 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Smo79331 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc04g010240.3.1 Solyc04g010240 component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g34294 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e014607_P001 Zm00001e014607 component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e040695_P003 Zm00001e040695 component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 36 89
No external refs found!