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  5. Cba_g71418

Cba_g71418 (SMT2, FRL1, CVP1)


Aliases : SMT2, FRL1, CVP1

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g71418

Target Alias Description ECC score Gene Family Method Actions
Ala_g04102 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g10359 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre12.g500500 SMT3 Lipid metabolism.phytosterols.campesterol... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008662 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo89663 SMT1, CPH Lipid metabolism.phytosterols.campesterol... 0.02 OrthoFinder output from all 47 species
Tin_g01801 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e033086_P001 SMT1, CPH, Zm00001e033086 sterol C-24 methyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR013705 Sterol_MeTrfase_C 302 365
IPR013216 Methyltransf_11 138 233
No external refs found!