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  5. Cba_g62359

Cba_g62359


Description : component *(eL28) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g62359

Target Alias Description ECC score Gene Family Method Actions
Adi_g025177 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Adi_g073738 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g41307 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g69046 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.93 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g26158 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g27550 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g35482 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp1g26940.1 No alias component RPL28 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Nbi_g33242 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g14043 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g26624 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05465 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g14505 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g37199 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g46661 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo164298 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g121330.3.1 Solyc03g121330 component RPL28 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g40565 No alias component *(eL28) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031144 proteasome localization IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!