Gb_03920


Description : transcription factor (SBP)


Gene families : OG_01_0000102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000102_tree ,
OG_02_0000092 (LandPlants) Phylogenetic Tree(s): OG_02_0000092_tree ,
OG_03_0000075 (SeedPlants) Phylogenetic Tree(s): OG_03_0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03920
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT1G27360 SPL11 squamosa promoter-like 11 0.03 Archaeplastida
AT3G60030 SPL12 squamosa promoter-binding protein-like 12 0.03 Archaeplastida
Cre16.g692500 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10428252g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_383231g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c13_17220V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e010067_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.03 LandPlants
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.02 LandPlants
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.03 LandPlants
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.03 LandPlants
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e010067_P001 No alias transcription factor (SBP) 0.03 LandPlants
Zm00001e013795_P002 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e021425_P001 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e025110_P001 No alias transcription factor (SBP) 0.02 LandPlants
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.01 SeedPlants
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.01 SeedPlants
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.01 SeedPlants
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.02 SeedPlants
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.02 SeedPlants
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.02 SeedPlants
Zm00001e010067_P001 No alias transcription factor (SBP) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004333 SBP_dom 249 322
No external refs found!