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  5. Cba_g60426

Cba_g60426 (tny)


Aliases : tny

Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g60426
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G53910 RAP2.12 related to AP2 12 0.03 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g28072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05453 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07122 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Als_g10058 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g10286 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g54140 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g09316 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g14725 CRF4 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g33297 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42576 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g29381 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70736 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21082.t1 Aspi01Gene21082 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21086.t1 Aspi01Gene21086 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21134.t1 Aspi01Gene21134 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene25596.t1 Aspi01Gene25596 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g18800 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.09 OrthoFinder output from all 47 species
Cba_g24909 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G059600.1 Ceric.12G059600 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Ceric.12G059800.1 Ceric.12G059800 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.05 OrthoFinder output from all 47 species
Ceric.12G059900.1 Ceric.12G059900 not classified & original description: pacid=50601963... 0.05 OrthoFinder output from all 47 species
Ceric.24G043100.1 DEAR4, RAP2.10,... not classified & original description: pacid=50629256... 0.03 OrthoFinder output from all 47 species
Ceric.28G014900.1 Ceric.28G014900 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g11691 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g33212 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g05268 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g05445 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g05508 No alias subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09318 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dcu_g17920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24404 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ehy_g12115 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g29769 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_26667 ATERF3, ERF3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Lfl_g25083 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.07 OrthoFinder output from all 47 species
MA_10431706g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_19854g0020 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_4032g0010 ATERF3, ERF3 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
MA_81029g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_914123g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.02 OrthoFinder output from all 47 species
MA_9785986g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp4g17430.1 RAP2.6 Ethylene-responsive transcription factor ERF112... 0.01 OrthoFinder output from all 47 species
Mp5g22160.1 ERF110 Ethylene-responsive transcription factor ERF112... 0.01 OrthoFinder output from all 47 species
Mp7g09350.1 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.01 OrthoFinder output from all 47 species
Nbi_g00522 No alias subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ore_g07820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g25668 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41367 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g17545 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119580.1.1 Solyc03g119580 transcription factor (ERF) 0.09 OrthoFinder output from all 47 species
Spa_g04960 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g16569 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08575 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.06 OrthoFinder output from all 47 species
Tin_g10351 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g15381 DREB26 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32520 RAP2.6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e015429_P001 Zm00001e015429 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023870_P001 RAP2.4, Zm00001e023870 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 111 161
No external refs found!