Cba_g59047


Description : not classified & original description: none


Gene families : OG0002205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g59047

Target Alias Description ECC score Gene Family Method Actions
AT5G04670 No alias Enhancer of polycomb-like transcription factor protein 0.02 OrthoFinder output from all 47 species
Adi_g011978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035731001 No alias No description available 0.05 OrthoFinder output from all 47 species
MA_10428588g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g09190.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013849 No alias not classified & original description: CDS=1-5280 0.03 OrthoFinder output from all 47 species
Solyc07g053190.4.1 Solyc07g053190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g067920.3.1 Solyc08g067920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g13150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e025916_P001 Zm00001e025916 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 1542 1636
No external refs found!