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  5. Cba_g58278

Cba_g58278 (RR12, ARR12)


Aliases : RR12, ARR12

Description : not classified & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g58278
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01816 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70563 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G121500.1 ARR11, Ceric.01G121500 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G008700.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g09662 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08440.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Mp4g21220.1 LUX, PCL1 component LUX of circadian clock Evening complex (EC) 0.02 OrthoFinder output from all 47 species
Msp_g24147 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26540 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08589 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Tin_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 167
IPR001789 Sig_transdc_resp-reg_receiver 1 57
No external refs found!