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  5. Cba_g56939

Cba_g56939 (STPL, WOX8)


Aliases : STPL, WOX8

Description : WOX-type transcription factor & original description: none


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g56939
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189010 STIP, HB-3,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
Als_g48487 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077390.2.1 STIP, HB-3,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 88 148
No external refs found!