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  5. Cba_g54719

Cba_g54719


Description : not classified & original description: none


Gene families : OG0002802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g54719
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Aob_g30396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g52452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
CC GO:0042729 DASH complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!