1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g54636

Cba_g54636


Description : component *(Sm-D2) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none


Gene families : OG0003421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g54636

Target Alias Description ECC score Gene Family Method Actions
AT2G47640 No alias Small nuclear ribonucleoprotein family protein 0.03 OrthoFinder output from all 47 species
AT3G62840 No alias Small nuclear ribonucleoprotein family protein 0.03 OrthoFinder output from all 47 species
Ceric.04G039600.1 Ceric.04G039600 component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021133.4 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Cre10.g453450 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species
LOC_Os05g24970.1 LOC_Os05g24970 component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
Pir_g15921 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Pp3c10_17640V3.1 Pp3c10_17640 Small nuclear ribonucleoprotein family protein 0.01 OrthoFinder output from all 47 species
Spa_g22292 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Spa_g46484 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Tin_g15303 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 29 103
No external refs found!