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  5. Cba_g53992

Cba_g53992


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g53992
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Als_g07990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01888 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.07 OrthoFinder output from all 47 species
Tin_g28865 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 172 214
IPR032308 TDBD 86 136
No external refs found!