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Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00252800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00094190 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G77170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G16835 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033661 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035547 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101037 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g36010 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10035 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30430 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09923 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36878 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03817 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04243 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05734 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07004 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g08782 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09867 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g18405 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25570 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g33579 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g70862 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene31781.t1 | Aspi01Gene31781 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34104.t1 | OTP84, Aspi01Gene34104 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0112.g045771 | No alias | not classified & original description: CDS=1-2433 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057201 | No alias | not classified & original description: CDS=1-3408 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0251.g060297 | No alias | not classified & original description: CDS=1-1806 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0269.g061123 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=107-3214 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063377 | OTP86 | not classified & original description: CDS=1-2337 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g02644 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04038 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05286 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07743 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14997 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20164 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29381 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29692 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77978 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G112800.1 | Ceric.04G112800 | not classified & original description: pacid=50632583... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G053200.1 | Ceric.07G053200 | not classified & original description: pacid=50626825... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G047500.1 | Ceric.10G047500 | not classified & original description: pacid=50612222... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.39G045800.1 | VAC1, ECB2,... | not classified & original description: pacid=50583112... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001657.6 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g02827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06637 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30448 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36894 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39492 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06434 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26405 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38580 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14560 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16109 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19229 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000968001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015233001 | EMB2261 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033906001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38824 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g27650.1 | LOC_Os01g27650 | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17755 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19012 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40700 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06151 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15576 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31404 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07619 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17317 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38541 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38628 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06449 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08923 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41304 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41642 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03427 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10914 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g40819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57717 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63512 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03245 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03628 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06968 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07449 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07461 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31968 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35775 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g43466 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g44900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53359 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59354 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g61597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g63607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g63789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006762 | No alias | nucleoporin of nuclear pore complex *(NUP98) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011780 | No alias | not classified & original description: CDS=1-2490 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28894 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo74388 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g005690.3.1 | Solyc06g005690 | Pentatricopeptide repeat-containing protein At5g59600... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24048 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25057 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04160 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09800 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24933 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g29865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 325 | 355 |
| IPR002885 | Pentatricopeptide_repeat | 697 | 721 |
| IPR002885 | Pentatricopeptide_repeat | 196 | 220 |
| IPR002885 | Pentatricopeptide_repeat | 770 | 791 |
| IPR002885 | Pentatricopeptide_repeat | 424 | 452 |
| IPR002885 | Pentatricopeptide_repeat | 496 | 518 |
| IPR002885 | Pentatricopeptide_repeat | 622 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 222 | 269 |
| IPR002885 | Pentatricopeptide_repeat | 521 | 569 |
| No external refs found! |