Cba_g52321

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g52321

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00035p00205430	AP2, FLO2, FL1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT2G39250	SNZ	Integrase-type DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
AT3G54990	SMZ	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.02	OrthoFinder output from all 47 species
AT5G57390	AIL5, EMK, CHO1	AINTEGUMENTA-like 5	0.03	OrthoFinder output from all 47 species
Adi_g014885	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g04901	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g05510	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Als_g14196	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g17577	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aob_g27594	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04754.t1	Aspi01Gene04754	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04754.t2	Aspi01Gene04754	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene24152.t1	PLT2, Aspi01Gene24152	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0059.g034553	AIL5, EMK, CHO1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0072.g037000	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G003200.1	RAP2.7, TOE1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.07	OrthoFinder output from all 47 species
Ceric.1Z150100.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dde_g30317	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dde_g42409	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g24256	RAP2.7, TOE1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Gb_30123	AP2, FLO2, FL1	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Gb_39931	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Gb_41702	ADAP	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os05g03040.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Lfl_g17116	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_121578g0010	DRG, CKC, CKC1, ANT	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
Msp_g31091	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g21617	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pp3c22_17870V3.1	Pp3c22_17870	target of early activation tagged (EAT) 2	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014417	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Solyc02g092050.3.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc03g123430.4.1	Solyc03g123430	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc04g049800.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g07247	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g10818	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e000558_P003	Zm00001e000558	transcription factor (AP2)	0.09	OrthoFinder output from all 47 species
Zm00001e004083_P002	Zm00001e004083	transcription factor (AP2)	0.06	OrthoFinder output from all 47 species
Zm00001e009225_P003	WRI1, ATWRI1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Zm00001e027593_P003	AP2, FLO2, FL1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Zm00001e029525_P003	RAP2.7, TOE1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Zm00001e033159_P002	RAP2.7, TOE1,...	transcription factor (AP2)	0.08	OrthoFinder output from all 47 species
Zm00001e037501_P005	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	13	67

External Links

No external refs found!

Cba_g52321

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation