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  5. Cba_g52256

Cba_g52256 (NTMC2TYPE4, NTMC2T4)


Aliases : NTMC2TYPE4, NTMC2T4

Description : not classified & original description: none


Gene families : OG0001021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g52256
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Cba_g42168 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15417 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 21 105
No external refs found!