Cba_g52240


Description : not classified & original description: none


Gene families : OG0000658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g52240

Target Alias Description ECC score Gene Family Method Actions
AT2G24550 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT3G03170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G26288 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT5G24890 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Als_g09075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15434.t1 Aspi01Gene15434 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g49370.1 ATOXS3, OXS3,... no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g32330.1 LOC_Os09g32330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g21797 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp4g19370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009689 No alias not classified & original description: CDS=199-924 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018962 No alias not classified & original description: CDS=559-1476 0.03 OrthoFinder output from all 47 species
Smo444788 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g031890.3.1 ATOXS3, OXS3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g025900.3.1 Solyc05g025900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g066420.4.1 ATOXS3, OXS3,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc07g041830.4.1 Solyc07g041830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g20746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010099_P002 Zm00001e010099 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015455_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e023244_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034592_P001 Zm00001e034592 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!