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Heatmap: Cluster_17 (HCCA)

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(Showing raw values)

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Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
35.02 5.33 10.19 9.17 7.41 3.4 7.35 6.19 15.39 15.1 18.51 29.44 4.59 2.23 5.44 3.06 4.25 3.02 13.55 5.6 2.79 3.46 5.1 2.21 0.74 1.73 0.94 4.27 2.7 0.81 5.63 1.41 1.14 0.79 4.57 2.18 1.25 2.44 1.38 0.32 0.83 0.13 0.32 1.98 1.16 0.0 0.0 0.64
46.97 11.91 34.38 32.63 39.28 46.37 37.11 26.34 14.11 5.9 7.82 101.21 13.86 7.4 13.77 6.69 11.03 11.44 5.87 9.78 10.93 5.28 6.29 8.88 1.69 8.5 7.03 8.23 11.85 1.35 8.38 7.29 6.97 10.22 6.13 10.34 7.52 9.46 7.24 0.84 0.86 11.43 22.85 17.97 9.06 35.49 0.06 11.57
AT1G04600 (XIA)
 32.58 1.17 5.95 5.86 6.45 11.4 7.23 14.98 19.02 10.33 14.5 25.42 6.28 0.37 4.81 0.06 0.02 0.06 11.64 0.72 0.15 0.18 0.43 0.39 0.11 0.16 0.16 1.44 0.85 0.07 0.91 0.14 0.12 0.11 0.83 0.31 0.2 0.46 0.89 0.49 0.17 0.19 0.29 1.54 0.59 0.0 3.23 0.45
AT1G08600 (ATRX)
 93.25 18.56 14.69 18.95 14.09 9.2 17.89 11.26 27.2 9.05 15.58 412.48 41.56 13.68 21.77 8.69 11.0 8.53 18.02 16.89 16.08 9.21 13.5 8.83 7.21 8.08 9.89 22.68 110.91 5.82 18.52 10.4 7.76 7.52 14.67 9.41 15.16 7.79 8.64 1.91 13.78 10.58 12.74 18.22 15.75 6.77 20.44 10.15
282.97 0.98 62.03 79.06 38.0 5.47 57.99 4.32 19.99 10.03 27.81 389.11 41.62 0.15 3.49 0.01 0.02 0.17 12.28 0.53 0.0 0.0 0.0 0.33 0.02 0.15 0.0 0.03 6.41 0.0 1.87 0.0 0.0 0.0 0.01 0.02 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01
101.79 12.97 14.32 17.0 19.95 22.6 19.43 14.62 11.09 7.12 10.42 98.56 24.35 6.21 16.02 21.26 12.96 7.7 12.34 8.67 4.59 6.67 5.83 6.25 4.54 7.11 6.0 6.98 3.93 4.58 7.74 7.56 6.69 3.85 4.96 3.17 4.38 7.61 3.76 2.73 11.28 9.78 1.61 2.09 1.54 0.0 0.0 0.78
5.81 1.45 4.54 7.46 3.64 1.56 8.12 0.9 1.35 0.81 1.02 21.19 1.42 0.66 0.6 0.6 0.49 0.47 2.43 1.12 0.32 0.44 0.64 0.62 0.32 0.31 1.95 0.65 2.74 0.23 0.79 1.2 0.92 0.98 1.47 0.41 1.76 0.92 1.22 0.0 0.0 0.19 0.51 1.62 2.07 0.0 0.0 1.52
AT1G32380 (PRS2)
 54.87 17.23 62.72 63.32 40.22 26.41 53.84 47.4 53.6 31.33 42.49 137.07 18.06 12.96 12.46 9.79 3.86 4.24 18.19 19.72 6.99 10.12 14.83 6.75 45.39 4.47 8.99 34.93 8.88 49.0 15.42 20.17 7.58 5.77 19.38 2.65 6.1 12.66 4.79 1.06 1.52 4.6 11.02 36.55 13.55 0.0 8.58 18.52
AT1G48310 (CHA18)
 36.48 9.02 14.78 20.33 12.41 8.9 20.07 9.84 10.94 5.99 10.58 135.36 14.19 5.84 8.0 2.65 2.32 1.65 3.9 6.94 3.93 4.55 6.39 4.26 3.13 3.38 3.88 10.85 12.33 2.9 5.71 3.74 3.89 3.23 5.72 5.02 4.95 4.95 4.28 0.55 1.1 4.0 5.9 11.35 5.74 0.0 0.71 6.05
AT1G51960 (IQD27)
 13.76 1.87 1.4 0.68 2.09 0.85 0.81 1.57 1.49 0.82 1.26 20.08 1.06 1.17 1.58 0.09 0.04 0.15 0.64 1.3 0.07 0.1 0.57 0.6 0.25 0.23 0.07 2.04 1.31 0.81 1.84 0.06 0.2 0.17 5.12 0.23 0.18 0.72 0.25 0.03 0.08 0.19 0.1 0.11 0.02 0.0 0.0 0.2
0.01 0.05 46.02 60.72 19.48 1.52 46.2 3.19 4.98 1.52 5.73 63.61 9.33 0.0 0.38 0.01 0.02 0.02 2.84 0.05 0.0 0.0 0.0 0.01 0.0 0.01 0.0 0.0 0.53 0.0 0.08 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2.11 0.1 2.65 2.0 2.44 0.76 2.13 0.76 0.21 0.34 0.18 4.31 0.72 0.01 0.27 0.01 0.0 0.0 0.85 0.07 0.01 0.01 0.0 0.04 0.02 0.02 0.39 0.0 0.36 0.05 0.15 0.02 0.0 0.0 0.13 0.0 0.01 0.04 0.02 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0
146.33 7.6 5.61 4.89 3.3 1.47 4.93 3.12 1.99 2.84 1.29 169.05 10.29 2.98 3.21 0.39 0.38 0.24 26.38 2.57 4.53 0.8 0.5 10.8 0.02 5.31 0.31 0.18 9.88 0.03 17.9 1.14 0.94 3.15 0.31 13.51 0.37 4.82 0.35 0.0 0.0 23.95 7.0 1.71 4.67 23.02 0.0 1.29
AT1G78540 (SHB)
 26.86 10.56 9.99 13.6 8.96 4.52 10.53 2.33 2.53 0.97 2.87 24.29 2.18 5.19 3.93 4.03 3.71 2.0 2.18 7.17 4.89 4.96 5.68 2.92 1.79 2.9 3.23 6.13 4.2 2.06 6.5 2.41 2.91 2.36 3.16 3.13 2.48 3.83 3.54 1.66 0.93 3.23 3.87 9.74 2.44 0.0 3.86 3.92
8.11 0.11 15.58 18.8 13.57 2.56 15.49 1.75 1.27 1.07 0.72 25.93 2.17 0.01 0.2 0.01 0.0 0.0 3.86 0.08 0.0 0.01 0.03 0.37 0.01 0.22 0.03 0.09 9.6 0.02 0.17 0.02 0.01 0.01 0.0 0.01 0.01 0.01 0.05 0.0 0.17 0.04 0.12 0.05 0.18 0.0 0.0 0.12
AT2G02240 (MEE66)
 9.48 1.14 0.39 0.4 0.89 5.24 2.18 17.71 5.76 3.56 2.23 53.17 16.37 3.01 7.47 2.87 1.54 0.71 4.18 1.09 0.25 0.7 0.54 0.75 2.07 1.63 18.19 0.06 0.7 0.54 0.36 0.56 0.3 0.25 0.13 1.27 2.49 0.6 1.16 0.0 0.21 0.32 0.55 0.08 0.42 0.0 0.0 0.15
71.12 0.03 16.92 13.25 7.46 1.12 12.63 0.62 0.55 1.75 0.4 114.14 27.99 0.05 0.09 0.0 0.0 0.0 1.72 0.05 0.13 0.0 0.0 0.35 1.48 0.15 0.41 0.24 4.08 2.42 0.05 0.61 0.03 0.15 0.0 0.0 3.53 0.78 0.18 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0
51.42 9.2 8.99 12.55 7.47 5.09 12.12 7.15 7.73 4.64 6.57 169.54 9.17 7.28 8.92 4.93 5.93 4.65 6.12 9.86 5.93 4.92 6.89 5.37 3.44 4.48 5.5 10.95 52.83 3.31 9.15 4.92 4.42 4.78 8.94 4.38 9.26 6.07 5.49 2.07 6.08 4.33 4.2 6.97 4.48 9.4 5.86 4.16
AT2G27120 (TIL2)
 4.75 0.44 2.27 3.77 3.01 2.39 3.35 1.58 0.96 1.18 0.35 19.87 3.23 0.25 0.56 0.02 0.0 0.02 1.67 0.36 0.0 0.04 0.03 0.36 0.0 0.21 0.01 0.13 7.65 0.0 0.97 0.1 0.01 0.14 0.02 0.04 0.01 0.02 0.0 0.03 0.01 0.01 0.04 0.04 0.04 3.5 0.0 0.02
12.22 0.69 6.78 4.16 9.09 1.0 1.73 0.17 0.5 0.13 0.39 9.48 0.07 0.26 0.25 0.58 0.1 0.0 0.17 0.25 0.49 0.21 0.0 0.33 0.2 0.58 1.64 0.0 2.3 0.17 0.6 0.42 0.26 0.0 0.09 0.0 1.16 0.31 0.24 0.0 0.0 0.0 0.0 0.0 0.0 1.27 0.02 0.0
17.48 3.53 1.74 3.88 1.3 0.49 3.28 1.4 1.16 1.21 1.55 26.75 6.28 1.72 2.06 0.43 0.41 0.71 2.22 3.8 0.45 1.81 3.57 1.33 0.07 0.49 0.12 6.77 3.94 0.05 4.24 1.6 1.05 0.42 5.7 1.07 0.14 1.41 0.1 5.55 0.0 0.49 2.25 5.65 2.92 0.63 0.04 4.04
7.56 0.07 10.61 7.92 10.34 9.28 8.95 5.03 2.16 1.96 2.08 13.54 5.56 0.03 0.61 0.01 0.0 0.05 1.66 0.03 0.18 0.0 0.02 0.2 0.0 0.12 0.11 0.0 2.42 0.0 0.11 0.11 0.0 0.03 0.0 0.0 0.08 0.01 0.02 0.11 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.04
41.6 12.21 11.54 11.11 12.02 6.78 11.2 5.66 12.92 7.4 10.98 81.72 10.23 4.73 5.41 1.6 2.18 3.11 10.64 10.62 7.21 4.13 6.29 3.88 5.29 2.53 8.92 11.11 13.95 4.31 14.6 7.51 2.61 3.68 11.61 2.73 0.68 3.75 1.05 1.64 1.73 4.01 5.22 12.35 8.1 7.34 7.99 7.56
50.9 10.09 122.57 124.79 96.14 48.09 118.67 11.62 12.07 5.81 9.21 184.14 15.89 5.49 6.24 5.26 7.58 6.66 13.38 10.9 9.5 3.84 6.32 8.14 1.9 4.9 0.55 14.01 10.32 1.73 13.34 7.59 5.25 6.21 8.22 4.21 0.82 8.68 1.02 0.1 0.46 4.65 9.78 32.51 17.49 6.3 0.22 29.0
27.96 14.75 23.4 27.96 15.22 7.06 22.86 6.09 4.08 2.18 3.79 36.56 3.75 6.89 9.11 4.35 3.58 3.64 4.85 12.68 5.59 6.05 9.98 5.05 1.72 4.18 6.29 11.57 10.41 1.79 11.91 4.06 4.28 2.79 9.32 4.6 4.06 5.56 2.44 8.55 3.52 3.37 5.02 11.91 5.44 2.11 7.75 6.08
AT3G05780 (LON3)
 12.31 0.07 2.6 0.14 4.76 4.7 0.17 0.84 0.0 0.49 0.0 12.99 1.09 0.01 0.23 0.0 0.0 0.0 1.4 0.03 0.0 0.0 0.0 0.11 0.0 0.05 0.0 0.04 0.71 0.0 0.02 0.06 0.01 0.06 0.0 0.0 0.02 0.01 0.07 0.0 0.0 0.0 0.01 0.42 0.18 0.0 0.0 0.11
12.36 1.21 19.1 31.41 14.29 3.43 27.92 2.33 2.72 1.99 2.49 68.85 4.56 0.04 0.0 0.13 0.05 0.31 4.68 1.85 0.95 0.35 0.46 0.07 0.0 0.03 0.0 0.0 0.55 0.0 0.08 0.0 0.0 0.0 0.03 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
23.8 0.11 14.41 10.01 17.99 10.69 11.09 5.76 3.7 2.33 2.32 21.55 5.07 0.09 0.84 0.0 0.0 0.0 1.55 0.06 0.0 0.0 0.0 0.29 0.0 0.09 0.07 0.02 3.44 0.07 0.16 0.02 0.01 0.0 0.0 0.0 2.29 0.34 0.07 0.33 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
31.06 10.99 28.87 26.51 18.97 4.75 23.65 1.3 1.57 2.1 1.03 69.95 9.9 2.91 3.41 0.79 0.35 0.37 5.29 7.29 9.21 1.47 1.5 6.29 0.42 2.75 2.25 6.25 31.29 0.9 21.75 3.4 2.48 1.11 7.1 5.36 14.08 6.18 3.19 0.32 0.93 0.13 0.09 0.28 1.04 0.0 0.03 1.1
14.92 0.02 11.07 5.88 8.54 2.88 5.55 0.85 2.31 0.7 1.44 23.37 3.99 0.02 0.09 0.0 0.02 0.0 0.93 0.02 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 1.32 0.01 0.1 0.0 0.01 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
12.64 2.34 0.93 1.27 0.7 0.33 2.26 0.14 0.0 0.15 0.0 8.08 2.1 0.7 0.47 0.21 0.11 0.39 0.99 2.57 0.19 0.68 1.22 0.77 0.0 0.3 0.0 2.76 0.97 0.03 3.14 0.9 0.26 0.28 3.54 0.22 0.0 0.46 0.02 0.33 0.02 0.21 1.31 4.05 2.35 0.0 0.0 3.12
AT3G60010 (SK13)
 1.72 0.7 51.1 97.04 30.11 1.89 75.98 1.28 1.59 3.37 2.66 95.69 25.49 0.15 0.0 0.17 0.28 0.42 12.09 0.32 0.13 0.13 0.23 1.11 0.06 0.48 0.32 0.25 15.35 0.11 0.89 0.0 0.13 0.02 0.03 0.53 0.76 0.25 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07
AT4G11720 (GCS1)
 22.65 0.65 5.07 4.83 2.32 2.37 4.3 6.67 10.56 3.36 8.6 58.66 1.86 0.09 0.77 0.04 0.02 0.01 1.24 0.45 0.02 0.2 0.82 0.21 0.01 0.11 0.0 1.85 0.32 0.04 0.25 0.15 0.16 0.07 0.48 0.04 0.03 0.31 0.0 0.12 0.0 0.13 0.31 1.7 0.47 0.0 0.0 0.74
4.99 0.35 81.16 39.16 49.9 7.61 32.63 6.46 9.43 3.22 7.29 102.8 13.76 0.17 1.0 0.05 0.15 0.13 5.51 0.49 0.07 0.08 0.16 0.31 0.04 0.04 0.0 1.97 0.29 0.0 0.42 0.06 0.04 0.02 0.12 0.05 0.23 0.22 0.05 0.24 0.0 0.0 0.11 0.76 0.17 0.0 0.07 0.18
3.99 1.13 65.01 39.54 56.25 10.84 32.91 4.44 6.87 3.72 7.16 87.96 16.51 0.13 0.81 0.1 0.0 0.0 0.68 0.06 0.26 0.14 0.0 0.02 0.0 0.0 0.0 0.97 3.99 0.0 0.0 0.01 0.09 0.08 0.08 0.0 0.0 0.13 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25
37.84 3.91 5.12 9.58 29.3 63.03 20.77 36.44 20.94 5.04 6.27 91.55 6.45 13.05 3.64 3.11 0.19 0.97 2.73 4.28 4.62 0.21 0.27 3.22 0.83 4.01 7.86 0.94 15.2 0.38 1.18 2.24 0.79 1.42 1.0 1.3 19.32 3.29 10.38 0.89 2.91 3.05 14.36 0.12 7.02 17.83 0.0 3.94
23.28 0.24 0.0 0.1 0.57 0.31 0.08 2.57 0.0 1.8 0.26 69.08 8.34 0.25 0.41 0.14 0.09 0.08 0.84 0.13 0.0 0.25 0.19 0.07 1.15 0.0 0.46 0.11 6.34 2.57 0.14 2.04 0.55 1.91 0.0 4.01 0.21 0.41 0.7 1.43 0.39 16.39 0.83 0.31 0.21 0.26 0.0 0.05
34.54 0.3 83.53 103.78 50.97 10.45 78.56 6.04 2.97 2.62 2.71 83.03 5.68 0.03 1.21 0.01 0.02 0.01 12.26 0.22 0.02 0.0 0.0 0.27 0.0 0.24 0.0 0.13 4.63 0.01 0.32 0.06 0.03 0.0 0.0 0.0 0.02 0.09 0.0 0.0 0.0 0.16 0.35 5.05 0.72 0.0 0.0 1.24
20.96 0.21 35.56 25.27 28.0 17.65 28.63 5.06 3.66 2.06 1.75 61.74 5.15 0.1 0.56 0.01 0.0 0.08 3.98 0.08 0.0 0.0 0.0 1.06 0.0 0.42 0.0 0.11 12.53 0.01 0.3 0.0 0.0 0.01 0.0 0.02 0.02 0.46 0.0 0.0 0.0 0.0 0.02 0.13 0.0 0.0 0.02 0.08
35.27 0.66 10.57 14.36 7.31 4.41 11.51 4.52 2.33 3.64 2.06 91.12 7.06 0.26 0.67 0.05 0.0 0.04 3.64 0.99 0.01 0.12 1.98 1.26 0.03 0.3 0.0 12.84 5.05 0.01 1.13 0.26 0.28 0.14 17.26 1.6 0.07 2.69 0.03 0.03 0.0 0.09 0.0 0.0 0.02 0.0 0.0 0.01
AT5G19910 (MED31)
 51.26 17.26 31.63 36.35 37.7 39.18 43.04 7.3 8.43 4.16 6.93 128.2 10.76 9.76 7.01 7.23 10.92 8.59 9.48 16.88 10.25 6.66 11.34 10.35 5.89 7.48 9.77 14.17 12.94 6.14 16.71 18.07 8.27 9.93 18.54 7.95 9.91 11.18 12.52 7.26 32.85 10.34 12.29 23.74 12.43 20.75 0.05 14.8
AT5G25380 (CYCA2;1)
 8.66 1.77 0.46 0.4 0.23 0.66 0.27 4.04 5.51 1.47 4.14 26.17 5.73 0.42 1.49 0.23 0.08 0.41 0.43 2.07 0.03 2.1 3.26 0.89 0.01 0.57 0.02 3.77 2.4 0.0 0.68 0.53 0.42 0.35 1.16 0.84 0.02 2.17 0.05 0.0 0.0 0.53 0.82 4.05 1.15 0.0 0.0 1.63
AT5G27610 (ALY1)
 158.71 2.6 7.65 5.9 6.37 5.0 5.43 5.81 5.87 5.79 4.1 307.74 24.65 2.83 3.94 0.99 1.22 0.89 7.63 2.31 1.97 1.96 2.67 2.12 1.55 1.41 2.81 3.72 65.54 2.02 2.3 3.64 1.88 3.15 2.28 1.97 3.07 2.54 2.6 9.42 26.4 3.33 3.52 4.68 3.14 0.08 1.24 2.78
0.0 0.11 13.61 3.36 6.89 2.72 1.74 2.74 0.87 0.6 0.71 14.06 5.68 0.06 0.1 0.02 0.0 0.0 0.69 0.07 0.0 0.0 0.0 0.05 0.0 0.02 0.09 0.0 0.46 0.0 0.07 0.42 0.11 0.08 0.0 0.0 0.0 0.06 0.14 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0
2.11 0.1 9.56 11.92 10.56 4.36 10.04 4.19 1.23 0.49 0.49 17.84 5.63 0.52 0.58 0.03 0.0 0.0 1.47 0.03 0.0 0.02 0.0 0.27 0.04 0.15 0.56 0.08 7.46 0.01 0.08 0.03 0.01 0.09 0.02 0.0 0.23 0.04 0.01 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.01
23.44 5.09 26.98 17.61 19.32 11.75 16.47 6.38 5.37 3.93 4.16 57.22 4.09 4.26 3.53 2.16 2.27 1.37 12.41 4.66 2.34 2.83 3.59 2.21 3.92 1.9 5.28 4.85 2.15 3.8 4.64 2.46 2.71 1.22 6.7 1.45 3.03 4.87 6.52 0.28 2.03 0.34 0.6 3.01 0.96 0.0 0.39 2.3
AT5G53520 (OPT8)
 44.57 1.14 1.82 9.65 4.38 6.45 11.59 8.65 6.66 4.27 5.33 128.14 9.9 1.12 0.78 0.0 0.01 0.0 1.59 0.24 0.0 0.01 0.0 1.07 0.02 0.17 0.0 0.0 80.06 0.0 3.0 0.0 0.0 0.24 0.0 0.02 0.03 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0
39.37 2.53 57.81 59.78 56.65 46.91 52.84 34.39 29.44 13.75 19.12 226.07 29.25 0.81 10.7 0.31 0.72 0.36 19.36 2.17 1.97 0.07 0.11 2.48 0.26 0.83 0.67 0.24 23.14 0.59 3.98 1.33 0.35 0.49 0.13 0.07 1.3 0.56 0.6 0.0 0.45 1.15 1.94 1.32 1.08 0.0 0.0 0.77

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)