Heatmap: Cluster_104 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G12260 (VND4)
-6.45 -1.52 -5.99 - - -3.99 - 0.24 -4.22 1.18 -3.23 -7.69 -0.77 -1.34 0.7 -1.14 -0.56 -1.68 -2.76 -2.18 0.62 -2.04 -2.04 -1.49 - -1.48 -7.06 -5.95 -7.09 -8.28 -3.06 -1.28 -1.13 -0.75 -2.31 -0.07 -3.17 -0.74 -3.9 - - 0.63 0.18 -2.69 -0.41 4.88 - -2.42
AT1G20850 (XCP2)
-5.34 -2.05 -8.74 -11.49 -11.04 - -11.54 - - - -11.62 - -12.28 -1.66 0.51 -0.49 0.35 -0.25 -6.27 -2.37 0.09 -0.66 -0.95 -0.46 -9.88 -0.06 -7.29 - -7.5 -9.65 -3.6 -1.01 -0.64 -0.0 -1.6 1.22 -2.22 0.37 -2.99 -3.7 - 1.11 -0.2 -7.32 0.36 4.81 - -4.46
-6.89 -5.06 - -8.41 -8.86 -8.78 -8.36 -6.92 - - -8.44 - - -4.63 -3.24 -8.36 -2.52 -0.7 -2.54 -5.72 -2.18 - -8.42 -4.12 - -4.63 -7.27 -5.11 0.76 - -4.58 -1.71 -3.29 -0.85 -8.79 -6.07 -3.76 -4.44 -5.83 - - 1.69 0.81 -0.41 -1.38 5.21 - -1.34
- -5.69 -1.63 -1.44 -1.96 - - - - - - - -2.28 - - - -2.63 - - -3.65 - - - -7.94 - - - 1.27 -0.43 - - - - - - -1.43 0.51 -5.97 -3.8 - - - - - - 5.37 - -3.44
- -1.54 -0.29 - 0.99 -2.72 1.75 -0.14 0.63 -1.52 0.03 - - - -1.17 - - - -1.22 -1.23 - - -2.26 -2.54 -1.51 - -2.37 -2.13 0.21 -1.7 -1.69 - -4.3 - -2.45 - -0.2 -3.85 -5.85 - - - - -1.57 - 4.99 - -
-5.79 -4.09 - - - - - - -7.93 - - - -5.8 -4.16 -6.49 -7.96 -6.7 -7.34 -7.29 -3.02 -0.56 -0.68 -0.16 -2.69 - -3.48 - -1.98 -2.09 - -4.65 -1.91 -2.37 -0.21 -4.3 0.03 -3.47 -1.42 -4.57 -8.52 - -3.86 -0.29 -0.98 0.09 5.28 -12.71 -1.24
- -4.72 - - -5.97 - - - - - - -9.38 - -4.25 -4.51 -2.74 -1.89 -0.96 -6.21 -3.19 -8.88 -3.14 -2.51 -2.06 -7.57 -1.82 -7.74 - -7.22 - -7.57 -2.64 -3.17 -2.72 -4.85 -1.58 -4.74 -3.07 -5.68 - - -0.27 -1.42 -4.17 -0.41 5.42 - -4.13
AT1G62700 (VND5)
-4.69 -0.38 -6.76 - - - -5.09 - - - - -8.46 - 0.52 0.27 -1.92 -2.09 -2.27 -4.54 -0.42 -0.54 -0.15 -0.11 -1.58 - -1.59 -6.59 -1.1 -5.08 -4.77 -2.97 -2.04 -1.33 -0.99 -1.25 1.61 -1.12 0.8 -2.7 -6.52 - 0.17 -0.11 -1.65 0.13 4.83 - -1.81
-3.66 -2.3 0.31 -0.53 -0.21 -0.88 -0.98 -5.96 - -8.0 -7.61 - - -1.95 -2.41 -2.71 -3.08 -2.76 -5.18 -2.87 -0.86 -1.93 -1.06 -2.16 -6.98 -2.58 - -4.87 -4.15 - -4.1 -2.46 -2.77 -2.21 -3.07 0.51 -4.47 -1.22 -5.05 - - -0.03 -0.58 -3.73 -0.86 5.17 - -3.69
-4.0 -0.74 -10.38 - - - -9.3 - - -11.92 - - - -0.56 -1.97 -1.79 -4.39 -5.62 -3.84 -0.92 -2.4 -1.31 -0.15 -1.42 -6.84 -1.9 -7.15 -1.73 -2.6 -9.3 -1.77 -1.88 -1.63 -1.27 -1.02 0.67 -3.39 0.22 -3.06 -8.26 -10.16 -0.76 -0.12 -1.81 -0.84 5.15 -10.35 -2.07
AT1G71930 (VND7)
-7.06 -3.11 - - - - - - - - - - -8.81 -2.65 -2.57 -3.17 -2.12 -2.81 -8.69 -4.11 -2.22 -3.13 -3.18 -3.27 - -3.27 - -4.53 -7.14 - -6.45 -3.84 -3.06 -2.23 -3.63 -1.66 -1.79 -2.13 -5.08 -4.91 - -0.57 -1.25 -3.97 -1.77 5.44 - -4.27
-3.72 -5.0 -3.4 -3.57 -4.09 -7.81 -3.93 -6.65 -7.62 -6.24 -5.55 -8.98 -2.07 -0.64 -2.76 -1.72 -3.02 -2.18 -1.08 -5.79 -7.17 -4.98 -5.54 -1.56 -1.75 -0.88 2.2 -6.74 -3.02 -5.57 -5.62 -2.18 -3.29 -2.44 -4.08 -2.73 -0.87 -2.63 -1.4 -6.25 -3.45 -4.09 -4.94 -7.77 -2.93 5.08 1.74 -8.91
- -4.98 -2.49 -1.02 -2.1 -0.29 - - - - - - - -2.95 - - - - - - - - - - - - - - - - - -3.7 -3.85 - - - - -6.43 - - - - 2.16 -1.34 1.88 5.17 - 0.5
-2.65 -0.56 -3.25 -4.22 -3.6 -4.68 -3.98 - - -9.46 -8.16 -8.48 - -0.9 -1.68 -1.46 -2.29 -1.98 -4.0 -1.0 -0.23 -0.74 -0.42 -0.41 -4.51 -0.37 -4.77 -1.92 0.29 -4.66 -1.71 -1.64 -1.06 -0.86 -1.07 1.16 -1.96 0.28 -2.41 -5.92 - 0.16 0.58 -1.13 -0.52 4.86 - -1.04
-1.25 -1.75 -0.75 -1.11 0.07 -0.38 0.08 -1.22 - - - -0.2 -3.38 -3.4 -0.62 -1.56 -1.89 -2.08 -1.04 -1.49 -3.04 -2.64 - -4.29 - - -2.81 -0.25 0.18 - - -2.83 -3.16 -3.35 -4.78 - -1.71 -2.88 -2.88 - - - -1.6 -2.02 - 5.1 0.41 -
-3.38 -0.82 - - - -8.49 -7.92 -8.52 -8.38 -9.74 -7.05 -4.14 - -1.22 -1.62 -1.0 -3.65 -4.55 -3.25 -1.78 -4.7 -1.81 -2.08 -2.65 -8.42 -2.27 -6.0 -1.18 -3.65 -8.75 -2.83 -0.72 0.4 -1.35 -1.93 -1.28 -3.25 -1.5 -2.75 -2.97 - -3.1 0.76 -0.62 -1.07 5.19 - -0.42
-9.08 -2.94 -4.24 -8.52 -4.07 - -5.5 -6.47 -6.43 -2.78 -6.97 2.6 0.37 -2.96 -3.42 -2.68 -2.89 -2.8 -4.97 -3.11 -1.36 -1.97 -1.9 -2.15 - -2.7 - -6.05 -8.32 -10.24 -6.05 -1.87 -2.79 -1.51 -2.07 0.88 -3.58 -1.01 -4.41 - - 1.26 0.22 -5.5 -0.49 4.92 - -3.95
AT3G08500 (MYB83)
-5.62 -1.23 - - - - - - - - - - - -1.71 -0.05 -1.74 -1.55 -1.37 -7.2 -2.19 -0.02 -0.34 -0.51 0.01 - 0.09 - - -7.6 - -3.02 -1.44 -1.49 -0.8 -1.81 1.54 -3.93 -0.66 -4.02 - - 1.17 0.11 - -0.84 4.96 - -4.54
-7.3 -9.06 - - - - - - - - - - - -8.39 - - -7.33 - - -8.91 -5.17 - -6.15 -6.91 -2.56 -9.22 -6.01 -3.85 -4.01 -0.92 - -2.95 -3.43 -2.75 -7.5 -7.14 - -5.86 - - - 0.54 -2.41 -0.29 0.34 5.42 - -2.73
-4.61 0.15 -7.47 -6.0 - - -4.58 -4.92 - -8.58 - - - 0.43 -0.43 -0.46 0.1 0.3 -3.42 -0.99 -0.38 -0.29 -0.06 -1.1 -4.79 -0.99 -3.18 - -3.33 -8.77 -0.05 -1.05 -1.86 -0.68 -0.29 0.9 -3.42 -0.5 -3.91 - - -0.29 -0.22 -1.74 0.03 4.81 - -1.82
-3.25 0.38 -4.02 -6.88 -4.21 -5.13 -6.93 -6.04 -8.14 -5.4 -6.6 -5.16 -4.69 -1.7 -2.02 -2.15 -2.07 -1.69 -4.06 -0.4 -0.04 -2.0 -2.16 -1.26 -2.47 -1.17 -0.55 -4.41 -3.83 -3.55 0.5 -1.92 -0.53 0.45 -2.17 -1.25 -0.76 -0.92 -1.5 -7.73 - 1.99 0.14 -3.0 0.68 4.81 - -2.44
AT3G22830 (HSFA6B)
-6.0 -7.21 -7.69 -10.82 -8.24 - - -11.33 - - - - -8.51 -5.48 -8.15 -7.38 -5.15 -5.13 -8.85 -5.29 -8.16 -7.28 -6.86 -3.72 -6.21 -3.33 -4.13 -2.63 -3.91 -10.02 -6.43 -3.53 -7.07 -4.44 -4.6 -7.34 -2.89 -3.01 -9.98 -4.66 -7.92 0.86 -1.84 -4.65 -5.23 5.43 0.75 -5.4
-1.42 -3.33 -0.97 -2.27 -0.5 - -2.27 - - - - - - -1.51 - -3.28 - - - -2.67 - - -2.29 -3.54 - - -2.49 -0.24 1.03 - - - -3.77 -2.76 -2.52 -2.36 -2.53 -3.77 -3.67 - - - -2.27 - - 5.35 - -
- -8.49 - -8.98 - - - - - - - - - -7.79 -3.48 - -3.96 -2.13 -9.68 -9.53 - -3.06 -3.96 -4.85 - -6.49 - -2.4 -5.36 - - -3.18 -1.79 -0.62 -6.0 -2.19 - -2.63 -4.94 - - -5.95 -0.46 -0.05 -0.84 5.42 - -0.87
-6.02 -4.24 - - - - - - - - - -9.85 -8.25 -5.31 -4.74 -4.8 -4.27 -4.39 -8.26 -5.16 -3.25 -3.71 -4.0 -4.69 -11.12 -5.5 - -10.74 -10.21 - -7.26 -3.24 -4.0 -2.82 -4.98 -3.09 -9.34 -3.91 -6.72 - - -1.69 -1.05 -1.57 -1.09 5.49 - -1.23
-9.43 -8.57 - -3.92 -8.64 - -3.78 - - - -8.22 - - - - - - - -6.45 -8.99 - -7.35 -4.45 -9.46 -8.59 -10.18 -8.31 -5.06 -7.56 -8.95 -10.63 -0.56 -3.03 -1.8 -12.07 - -8.07 -5.02 -8.96 - - -2.72 0.96 2.4 1.64 5.05 - 1.59
- -1.85 - -2.57 - - -2.8 - -2.31 - - - - -0.96 -2.21 -3.95 -5.8 -5.93 -3.96 -0.87 - -1.27 -0.23 -4.78 -6.01 -4.67 -5.73 -0.32 -1.98 - -5.47 -1.31 -1.29 -1.12 -0.28 -0.21 -1.34 -0.07 -3.89 - - -0.91 1.08 -0.18 0.59 5.05 - -0.36
-5.28 - -8.57 -8.39 -6.26 -5.56 -7.32 -3.26 -7.12 -8.19 - - -6.64 -8.05 -5.71 -10.39 - - -5.09 -8.44 -8.06 -9.32 -7.74 -8.94 - -10.46 -7.82 -6.67 -7.93 -8.38 -10.8 -3.22 -2.93 -0.42 -11.57 -6.79 -6.53 -8.76 -7.16 - - 2.26 2.45 -1.85 1.18 5.05 -9.39 -0.58
AT4G14940 (AO1)
-5.76 -2.63 -8.7 - - - - - - - -9.6 - -7.39 -3.14 -1.95 -4.17 -4.77 -5.08 -2.62 -3.32 -2.48 -1.93 -2.88 -2.85 -8.76 -3.59 -5.71 - -4.82 -9.29 -5.8 -1.57 -1.7 -0.85 -4.12 -0.1 -5.88 -1.63 -4.83 -5.21 -5.75 0.61 0.35 -2.35 0.6 5.26 - -0.43
-2.59 - -1.48 1.35 -1.66 - 0.91 -5.72 -5.55 -5.23 -4.75 -1.32 -3.88 -6.05 - - -4.2 -5.64 -0.53 -5.05 - - - -7.24 - -4.25 - - 1.06 - -6.79 - -7.59 -6.33 -9.26 -2.57 -3.27 -5.36 -5.9 - - -4.18 -4.02 - -4.09 5.27 - -6.19
AT4G26890 (MAPKKK16)
-0.43 -2.38 -4.46 -3.81 -4.4 -1.7 -3.05 -6.83 -7.66 -9.63 - -5.75 -1.93 -3.64 -2.83 -3.49 -0.84 -1.08 -5.84 -2.51 -8.42 -4.23 -4.17 -2.47 -7.7 -2.69 -5.5 -3.59 -0.86 -8.08 -2.02 -2.68 -3.36 -1.0 -6.24 -3.12 -4.14 -4.28 -3.01 - -3.11 0.04 -0.39 -2.98 0.32 5.27 -13.16 -1.96
AT4G35350 (XCP1)
-7.55 -2.72 -8.33 - -8.94 -8.61 -8.63 -10.26 -9.07 -8.94 - -9.71 - -2.57 -0.37 -1.5 -0.78 -1.16 -8.88 -3.64 -0.47 -1.63 -1.62 -1.87 -11.72 -1.84 -7.35 -9.19 -7.28 -7.96 -4.89 -1.42 -1.5 -0.16 -2.87 0.11 -3.82 -0.8 -4.14 -10.27 - 1.26 0.26 -6.18 0.77 5.11 -14.99 -4.22
AT4G36160 (VND2)
-3.27 -2.04 - - -8.47 -5.75 - -4.68 - -8.21 - - - -2.19 -1.26 -2.18 -3.61 -4.68 -5.14 -2.07 -0.15 -1.96 -1.67 -2.91 - -3.15 -7.99 -3.89 -7.47 - -3.67 -3.36 -3.28 -3.14 -3.6 -1.33 -3.88 -1.94 -4.99 -2.07 - -1.38 -1.16 -3.8 -2.97 5.39 - -3.29
-4.13 -3.87 - - - - - - - - - - -4.09 -3.36 - -5.31 -6.06 - - -4.89 -6.11 -3.65 -3.95 -6.03 - -5.75 - - -7.32 - -6.84 -5.84 - -4.94 -6.06 -4.39 - -5.05 -8.49 - - -2.66 -5.89 -4.31 - 5.56 - -4.74
-5.53 -3.26 -4.3 -4.55 -3.81 -7.27 -4.33 - - - - - - -2.69 -2.01 -4.42 -3.33 -3.36 -6.66 -3.65 -5.25 -2.92 -2.71 -3.42 - -4.18 - -4.19 -2.69 - -3.62 -2.86 -3.88 -3.54 -3.65 -0.35 -5.91 -2.84 -6.4 - - -0.8 0.36 -1.9 -1.31 5.4 - -2.2
- -3.84 - - - - - - - - - -7.94 - -3.29 -4.55 -4.8 -4.91 -4.57 -7.84 -4.93 -2.96 -3.61 -4.03 -0.57 -6.88 -0.63 -4.99 -4.5 -5.29 -4.77 -5.67 -3.05 -2.48 -1.54 -5.74 0.75 0.92 -0.49 -3.8 - - 0.38 0.36 -1.12 -0.36 5.2 -13.06 -1.41
AT5G23860 (TUB8)
-0.97 -1.29 -2.97 -2.0 -3.09 -3.98 -2.26 -7.39 -6.2 -8.6 -6.53 -6.88 -8.94 -2.0 -0.98 -2.19 0.27 1.12 -3.41 -1.09 -3.21 -1.08 -0.53 -0.08 -7.46 0.13 -5.88 -2.08 -2.79 -9.42 -1.74 -2.05 -1.59 -0.49 -1.66 0.82 -4.4 -0.49 -3.09 -5.56 -10.55 -1.72 0.11 -1.32 0.04 4.89 -9.84 -0.7
-5.81 -1.85 - - - - - - - - - - - -2.27 -4.46 -1.14 -0.97 -0.68 -6.19 -2.36 -0.01 -1.0 -1.68 -1.02 - -1.32 -5.36 - -3.74 - -4.4 -1.45 -1.51 -0.94 -2.11 2.25 -2.17 0.39 -3.33 -6.14 - 1.68 0.36 -7.66 -0.15 4.88 - -2.87
- -2.56 - 0.45 -1.71 -2.1 -1.98 - -1.95 - - - 1.27 -2.87 - - - - - -1.95 - - - - - - -1.5 -1.5 -0.18 -1.09 -4.06 - -3.03 - -5.51 - - -4.52 - 0.16 - -0.62 -1.53 -0.95 - 5.23 -3.61 -
0.4 -1.12 0.81 1.37 0.94 -0.69 1.82 -6.55 -5.37 -7.74 -5.05 -3.1 -5.22 -2.49 -4.94 -4.86 -5.54 -5.47 -4.74 -3.88 -4.7 -2.91 -3.67 -3.39 -5.27 -3.11 -5.38 -3.19 -1.72 -7.26 -4.67 -3.95 -4.76 -4.24 -4.47 -3.54 -3.29 -2.33 -4.94 -1.56 - 0.18 -4.35 -4.75 -2.92 5.0 - -7.08
-4.25 -0.35 -4.07 -3.04 -4.49 -6.72 -3.38 - - - - - - -0.18 0.08 -0.99 -0.26 1.15 -3.81 -1.48 -3.09 0.04 -0.01 -1.58 - -1.55 -6.37 -4.54 -4.52 -8.01 -0.96 -1.32 -1.62 -0.6 -0.37 0.91 -2.43 -1.35 -3.71 - - 0.15 0.29 -1.11 -0.0 4.84 - -1.59
-4.61 -2.28 -3.04 -2.48 -4.47 -5.76 -3.16 - -5.43 - - - -4.94 -4.52 -6.31 -6.05 -5.18 -4.33 -6.05 -2.75 -5.99 -4.71 -2.72 -4.98 -1.28 -4.78 -3.68 -1.22 -1.91 -2.81 -3.6 -2.48 -3.29 -1.24 -1.9 -0.03 0.88 -2.09 -3.41 -1.42 - -1.02 -1.25 -0.52 -0.81 5.26 -3.6 -1.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.