Heatmap: Cluster_16 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
-0.75 -0.78 -0.23 0.13 -0.3 -0.25 0.19 0.59 0.38 0.35
- -1.8 -3.23 -3.51 -1.34 -2.41 0.34 -0.46 0.36 2.5
-6.37 -1.71 -3.19 -5.07 -0.06 -4.57 0.68 0.58 1.4 1.49
0.51 0.19 -0.03 -0.64 -0.71 -0.54 -0.68 -0.05 0.64 0.46
Spa_g01678 (GGPS1)
-1.74 -5.55 -3.54 -2.62 -1.87 -1.3 -0.54 0.79 2.21 0.77
Spa_g01757 (VPS28-1)
-1.87 -1.34 0.44 -2.07 0.24 -1.68 0.55 0.5 1.19 0.11
0.05 0.14 -0.09 -0.26 -0.32 -0.27 -0.27 0.12 0.28 0.41
-0.41 -0.33 -0.36 -0.46 -0.55 -0.04 -0.14 0.39 0.75 0.48
- -1.87 - -3.72 -2.47 -5.86 -1.29 1.09 0.68 2.41
-2.55 -1.9 -1.04 -4.62 -0.11 -4.54 -0.72 -0.28 0.58 2.36
-2.76 -0.1 1.15 -1.89 -1.01 -1.67 -2.03 0.02 1.34 0.86
- - -0.68 - - - - -0.11 1.89 2.24
- - - - - - 0.99 1.28 0.64 2.02
Spa_g05801 (GIS)
- - -1.05 - -5.02 - -6.12 0.09 1.83 2.28
-4.21 -3.24 -2.67 -3.47 -0.58 -1.74 0.64 1.03 1.29 1.36
-6.5 -1.64 -2.13 -3.2 -1.09 -3.18 0.42 -1.56 0.27 2.55
-0.43 -0.45 -0.98 -0.33 -0.13 -0.93 0.04 0.8 0.6 0.58
0.17 - -0.11 -3.7 - -5.07 - 1.24 1.63 1.25
Spa_g07952 (ICL)
-4.82 0.0 -3.32 -2.6 -0.47 -3.04 0.34 -1.36 0.88 2.13
- 0.08 -0.95 -1.23 0.37 -1.71 0.03 -1.09 1.37 1.22
-0.04 -2.62 0.53 -1.49 -1.36 -0.95 -0.75 -0.99 0.82 1.72
-2.84 -6.18 -1.21 -2.81 -4.22 -2.43 -3.72 0.04 1.34 2.43
Spa_g11723 (CAD9)
-0.17 -6.63 -1.56 -3.05 -6.51 -2.55 -6.04 0.47 0.84 2.4
-1.25 -1.3 -1.25 -0.64 -0.02 -0.68 0.4 0.29 1.33 0.52
-0.11 -0.56 -0.52 -1.2 -0.34 -0.93 0.27 0.77 0.87 0.28
-3.22 0.45 -0.35 -1.81 -0.6 -2.59 -0.08 -1.2 1.58 1.18
-1.0 -1.46 -2.71 -1.21 -1.91 -0.31 -1.52 1.2 1.16 1.38
-0.79 -0.8 -0.36 0.0 0.03 -0.11 0.41 0.66 0.26 -0.0
- -1.73 -1.78 -1.78 -2.17 -1.98 0.41 -3.39 -0.0 2.64
Spa_g17410 (AGB1)
-0.69 -0.48 -0.56 -0.4 -0.57 -0.16 -0.09 0.35 0.95 0.59
- -0.59 -1.52 -1.35 -0.84 -1.35 -0.13 0.1 1.73 1.22
- - 0.45 - -1.18 - 0.54 0.0 1.91 0.98
Spa_g21643 (TSB2)
-3.87 -1.29 -2.41 -4.32 -0.28 -4.85 0.64 1.03 1.32 1.22
Spa_g21929 (CPK7)
-1.73 -0.95 -5.77 -0.46 -0.36 -0.39 0.66 0.61 0.71 1.11
-0.12 0.19 -2.17 -0.33 -0.83 -0.59 -0.67 0.32 0.39 1.33
0.37 -1.11 -1.35 -1.89 -0.81 -0.63 -1.43 1.02 0.9 1.07
-0.81 -0.03 0.05 -0.92 -0.08 -1.29 0.38 0.06 0.92 0.37
-2.22 -0.11 -0.75 -0.95 0.11 -0.65 0.21 -0.62 1.09 1.06
Spa_g24565 (ACR3)
0.29 0.05 -1.24 -1.38 -0.76 -0.97 -0.48 0.48 1.0 0.79
-0.68 -0.53 0.07 -0.82 -0.65 -0.99 0.02 0.18 1.12 0.68
-2.65 -4.69 -2.57 -0.12 -1.81 -0.12 -0.65 0.37 0.61 2.02
-1.99 -1.73 1.35 -1.19 -1.24 -1.46 -0.64 0.54 1.26 0.24
-0.65 -0.81 -0.47 -0.15 -0.53 0.12 -0.47 0.51 0.73 0.66
Spa_g26584 (DFL2)
-2.07 -2.07 -3.1 -2.7 -1.45 -2.55 -0.39 1.77 0.57 1.61
-4.06 -4.94 1.59 -6.92 -5.87 -5.57 - 0.96 1.68 0.77
-0.06 -0.37 -0.63 -1.09 -0.95 0.11 0.38 0.05 0.92 0.41
-0.75 -0.35 -0.43 -0.72 -0.4 -0.88 -0.1 -2.36 1.43 1.11
-1.31 -2.73 -0.15 -2.82 -0.95 -1.16 0.08 -1.99 0.4 2.27
- -2.52 0.9 -2.31 -3.76 -0.5 - - 1.03 2.3
-1.34 -1.24 -3.41 -0.58 -0.31 -0.88 0.04 0.79 1.06 1.15
-3.77 - 0.1 -1.94 0.06 - -0.19 0.95 1.3 1.19
0.37 -0.0 -0.09 -0.52 -0.62 -0.4 -0.5 0.26 0.69 0.2
- - - - - - - -1.3 1.64 2.7
-0.61 -2.36 -2.11 0.22 -1.39 -0.67 0.16 1.03 0.41 1.17
-2.76 -1.83 -3.21 -3.26 -0.97 -2.94 0.1 -0.34 0.88 2.33
- -3.11 - -2.23 -1.17 -1.14 0.14 -1.19 1.34 2.23
-4.33 -2.9 0.13 - 0.01 -4.04 0.51 -6.59 2.09 0.98
-2.01 -2.93 -3.67 -1.36 -0.23 -1.85 0.36 0.85 1.37 1.23
-1.05 0.37 -0.77 -1.05 0.33 -0.77 0.21 0.24 0.4 0.73
Spa_g31038 (CKX5)
0.63 -2.22 0.26 -5.73 -2.34 -4.46 -2.01 -0.07 0.57 2.04
-4.45 - 1.61 - -4.9 - - 1.01 1.62 0.85
- - -0.9 -3.99 -0.12 - 1.06 - 1.8 1.54
-5.7 0.44 -3.16 -2.36 -0.17 -3.48 0.45 -3.07 0.77 2.05
-0.51 -0.65 -1.65 -1.44 -1.14 -1.57 -0.33 0.08 0.62 1.92
-0.46 -1.19 -0.23 -0.79 -0.91 0.04 -0.29 1.04 0.74 0.39
-3.91 -0.4 -0.99 -4.02 0.43 -2.68 -0.21 0.6 1.01 1.44
-3.68 -1.1 -1.59 - -0.8 -0.71 0.67 -1.48 0.29 2.26
Spa_g38314 (MYC2)
-7.96 -7.94 -1.95 -4.98 -1.89 -4.22 -2.5 -0.75 1.65 2.45
-1.02 0.96 -1.95 -0.77 0.12 -1.12 0.04 -0.28 0.19 1.12
-2.12 -1.22 0.71 -3.33 0.31 -2.38 0.18 0.3 1.02 0.83
-3.71 -1.04 -0.85 -1.3 -0.43 0.03 -0.6 0.24 1.55 0.96
-1.65 -1.06 -2.91 -0.47 -0.6 -0.63 -0.01 0.7 0.66 1.51
Spa_g41108 (CPK30)
-0.7 -0.09 -2.26 -1.53 -2.04 -1.62 -0.89 1.28 0.9 1.31
Spa_g41318 (CYP704B1)
-1.32 -5.99 -0.9 -3.61 -4.23 -4.17 -1.95 -0.4 1.2 2.47
Spa_g41392 (CPK7)
-0.43 -2.69 -2.79 -0.9 -0.77 -1.25 0.14 1.19 1.05 0.96
Spa_g41393 (CPK13)
-0.65 -1.81 -5.1 -0.57 -0.55 -1.07 0.08 0.9 0.77 1.37
Spa_g42160 (SWEET11)
-3.15 - -3.77 -3.38 - -1.4 - -2.76 1.39 2.72
-4.11 -2.4 0.22 -0.97 -0.94 -0.85 -1.59 0.2 0.72 1.95
- -0.66 - 0.24 -2.52 -2.3 -2.38 - 0.99 2.49
-0.74 -1.74 -0.75 0.36 -1.86 0.4 -1.47 0.56 0.88 0.96
-3.82 -5.48 -2.57 -3.53 -3.16 -5.29 -3.04 -3.02 2.14 2.28
-0.87 -0.99 0.42 -0.81 0.21 -0.5 -0.15 0.54 0.62 0.36
-3.83 -2.08 -0.29 -0.64 -0.15 -1.82 0.27 0.48 0.21 1.72
Spa_g46670 (PTR2)
-6.36 -3.06 -0.23 -6.7 -2.07 -5.64 -2.66 0.95 2.03 1.35
-1.44 -2.23 0.35 -1.0 0.11 -0.66 0.21 1.1 0.61 0.14
-0.65 -0.74 0.41 -0.77 -0.17 -0.68 0.26 0.06 0.84 0.38
-1.74 -1.86 0.75 -1.43 -0.81 -2.07 -0.19 -0.71 1.51 1.16
-2.38 -1.65 -3.6 -1.01 -0.37 -0.64 -0.08 0.98 1.6 0.63
-1.77 - -1.72 - -1.51 -2.22 - 1.91 1.15 1.51
-0.58 -0.22 -0.45 -0.2 0.01 -0.24 0.03 -0.09 -0.06 1.06
0.46 0.01 -0.05 -0.82 -0.42 -0.42 -0.67 0.24 0.71 0.2
Spa_g56926 (PIP2)
-1.07 -1.02 -0.27 -0.25 -1.6 -0.04 -1.31 0.72 1.0 1.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.