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Heatmap: Cluster_20 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
7.36 21.37 18.2 1.26 2.9 1.32 1.6 4.52 2.99 4.93
52.76 48.97 70.61 1.72 1.63 2.44 4.64 10.1 6.7 0.16
8.48 27.09 22.61 5.53 10.58 5.87 10.83 6.25 6.55 7.62
6.47 4.0 4.13 0.14 0.22 0.15 0.29 1.63 0.61 0.01
13.24 11.52 19.09 2.97 1.78 3.66 1.46 4.53 2.79 4.78
9.77 17.96 12.76 6.39 8.92 5.17 6.29 6.51 7.43 6.96
Spa_g08431 (SD2-5)
 3.5 11.51 9.36 0.32 1.53 0.39 0.66 2.48 4.52 0.2
85.07 258.29 161.97 25.26 17.69 25.78 21.26 34.37 59.55 44.52
28.82 30.25 30.04 10.01 8.3 12.8 7.23 7.25 8.29 7.57
70.71 44.54 129.23 10.13 0.83 6.84 1.05 6.2 4.09 42.41
Spa_g11572 (DDB2)
 9.59 6.06 12.25 1.4 1.52 0.94 1.12 3.16 0.93 0.94
13.51 14.22 19.45 8.22 5.52 8.07 5.34 8.88 4.81 6.99
Spa_g12565 (RVE2)
 4.62 11.93 9.1 0.73 2.45 0.71 1.42 3.67 1.4 3.28
Spa_g12829 (MRP6)
 16.17 46.01 33.19 13.78 10.3 16.37 9.78 12.96 13.81 14.44
0.98 2.68 1.8 0.09 0.18 0.0 0.06 0.29 0.06 0.48
2.15 11.34 15.2 0.25 0.45 0.32 0.3 0.22 0.0 1.02
Spa_g13471 (OPT4)
 9.67 8.88 14.01 3.04 2.81 3.36 2.71 2.91 1.51 2.49
Spa_g13679 (scpl42)
 21.2 17.66 25.36 0.93 0.48 0.44 0.37 0.83 1.55 1.22
0.74 4.41 7.06 0.1 0.19 0.21 0.0 0.0 0.1 0.0
5.3 13.21 10.1 0.83 2.47 1.34 1.72 3.49 1.31 4.34
16.12 14.44 28.73 2.02 0.93 1.49 0.17 4.73 2.63 2.49
Spa_g14392 (CCH)
 2.18 5.03 2.93 0.24 1.03 0.63 0.24 0.59 0.61 1.08
Spa_g14837 (scpl42)
 31.28 33.75 46.98 1.98 2.24 2.57 2.27 5.68 11.91 0.75
3.0 1.69 5.63 0.45 0.58 0.73 0.47 0.64 0.5 0.96
0.0 3.93 7.61 0.0 0.14 0.0 1.48 0.0 0.81 0.65
Spa_g15783 (CRCK2)
 16.9 18.73 23.51 3.81 2.61 4.14 2.69 12.09 8.49 3.63
3.07 2.56 5.3 0.75 0.3 0.74 0.34 0.86 0.6 1.6
3.01 3.84 4.76 0.33 0.32 0.51 0.0 0.71 1.06 0.99
17.26 339.1 417.38 8.84 2.45 13.27 0.33 2.52 1.48 2.86
5.83 4.56 8.68 0.69 0.88 0.53 0.93 2.5 1.12 1.97
Spa_g18018 (SPL8)
 16.23 7.18 15.04 0.08 0.2 0.1 0.04 4.91 1.23 0.47
2.85 7.41 6.22 0.39 2.18 0.62 1.09 2.22 1.53 1.31
Spa_g18173 (CENP-C)
 4.55 25.74 16.75 1.36 2.6 1.24 1.9 5.7 2.96 2.74
Spa_g18429 (ATTPPA)
 3.35 10.29 17.19 4.46 1.5 3.96 0.76 3.4 1.73 4.04
1.81 4.02 2.16 0.06 1.5 0.68 1.09 0.45 0.58 0.77
Spa_g18858 (LIP1)
 38.13 40.9 36.21 2.5 0.88 2.3 0.3 1.62 0.28 1.42
0.19 9.79 13.04 0.01 0.0 0.02 0.0 0.0 0.02 0.0
8.32 5.88 15.45 0.89 1.13 1.48 1.93 3.09 1.47 1.57
96.56 51.2 91.01 31.5 23.5 32.54 19.6 33.48 22.01 23.29
6.19 6.8 5.78 0.28 0.79 0.66 0.37 1.23 0.56 0.68
8.78 30.53 28.71 2.42 2.99 2.23 3.59 5.68 10.92 6.4
Spa_g24604 (VTE5)
 26.33 25.79 26.82 4.77 9.76 5.08 9.26 15.68 12.17 6.29
19.92 64.54 57.06 3.76 3.82 4.28 4.49 9.0 17.5 12.35
Spa_g24928 (ORP4B)
 8.17 5.74 11.87 2.15 2.05 2.14 2.08 4.04 1.6 2.48
1.58 2.73 3.23 0.28 0.59 0.38 0.32 0.44 0.99 0.41
12.56 10.86 9.43 1.06 1.26 1.55 0.96 2.82 1.25 0.62
11.07 10.55 11.23 0.62 1.23 0.63 0.92 1.26 0.92 1.87
31.71 29.63 36.18 16.94 20.2 19.05 23.04 17.17 25.84 22.81
1.69 4.18 4.68 0.15 0.8 1.27 0.4 0.99 1.17 0.5
0.25 1.39 2.82 0.13 0.0 0.0 0.0 0.06 0.4 0.0
0.0 23.17 39.83 0.35 2.08 0.0 5.25 1.12 7.87 3.75
129.44 244.39 232.89 0.71 0.16 1.08 0.6 0.23 26.99 1.17
27.42 66.27 52.09 8.31 5.41 6.7 3.3 19.37 7.89 5.69
3.19 12.79 10.15 0.97 4.58 1.09 1.93 2.69 1.59 1.62
4.85 4.65 6.21 1.18 0.76 1.25 1.29 3.73 1.86 3.17
Spa_g36391 (ECT5)
 4.5 4.93 6.95 1.43 1.94 2.32 2.0 2.91 2.59 2.79
23.61 12.51 44.59 0.55 0.14 0.62 0.14 0.15 6.57 3.3
3.12 4.99 3.8 1.15 1.65 1.28 1.25 0.34 0.9 0.94
6.85 16.37 12.58 4.74 5.3 4.75 5.68 6.26 5.9 4.56
5.69 20.6 20.08 1.66 1.89 1.69 0.97 0.04 1.25 0.27
0.75 2.47 1.97 0.0 0.11 0.04 0.04 0.0 0.0 0.05
13.54 8.39 21.67 2.86 3.06 4.6 5.44 5.92 4.6 4.77
2.41 1.73 4.53 0.16 0.21 0.19 0.19 0.47 1.15 1.59
2.09 5.27 3.73 0.44 0.35 0.47 0.23 1.33 0.49 0.68
8.42 7.35 13.0 0.94 0.06 1.09 0.02 0.33 0.11 2.72
6.98 4.59 13.17 0.71 0.56 0.78 0.39 2.19 1.2 0.22
0.35 5.17 6.25 0.0 0.0 0.0 0.0 0.66 0.0 0.0
Spa_g47685 (LACS4)
 58.14 28.63 47.38 18.63 12.21 19.14 12.01 21.34 14.84 10.23
4.41 2.32 5.83 1.0 0.44 0.98 0.31 1.22 0.66 1.63
Spa_g47724 (ACR3)
 0.09 13.46 23.93 0.01 1.65 0.0 3.51 0.72 4.99 2.25
7.47 3.65 5.3 0.2 0.05 0.0 0.0 0.69 0.02 0.0
Spa_g50176 (BLH2)
 13.0 10.35 12.91 0.4 0.23 0.57 0.62 2.04 1.25 0.01
Spa_g50188 (CHM)
 1.87 1.84 3.76 0.93 0.74 0.95 0.69 1.29 0.86 0.47
2.44 3.43 5.47 0.34 0.05 0.86 0.12 0.81 0.3 0.0
8.58 4.51 13.06 1.92 2.3 1.84 2.77 2.02 1.33 3.25
2.65 13.35 10.53 1.09 2.65 1.1 2.57 2.27 1.1 0.86
34.57 52.04 47.54 12.44 14.0 12.61 15.11 5.03 14.03 8.09
Spa_g54061 (MRP6)
 13.0 33.15 27.18 11.82 8.93 13.92 8.93 9.72 9.83 15.11
15.61 20.04 12.93 0.98 2.34 0.93 3.4 1.09 0.56 3.19
1.48 19.79 16.65 1.25 2.79 0.1 1.89 0.09 0.1 1.09

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)