1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_7 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.99 0.67 0.63 1.95 1.5 1.39 3.37 3.77 2.99 3.32 1.48 2.62 0.64 0.28 0.78 1.4 2.28 2.23 1.9 0.0 0.0 0.0 2.11 1.51 0.0 2.59 3.38 4.13 2.47 3.75 4.9 4.54
Smo100734 (MYB119)
 1.77 2.16 3.94 4.13 3.94 6.02 10.87 7.04 8.16 9.29 5.71 5.42 7.05 7.02 10.35 8.34 15.25 11.02 4.07 0.0 3.51 0.0 10.97 5.89 1.98 5.46 18.99 14.37 13.09 12.82 18.26 20.32
15.36 20.85 27.78 29.65 29.76 43.3 55.24 45.79 49.09 53.51 37.76 30.03 9.87 19.59 21.89 13.11 20.24 17.96 16.74 0.0 0.14 5.79 14.52 10.69 2.21 6.25 19.4 18.79 30.39 30.66 66.81 46.74
13.85 17.82 22.22 25.73 27.28 34.12 46.34 44.47 45.47 45.72 31.08 24.02 10.05 18.72 22.88 13.6 23.0 18.05 19.71 1.2 7.41 2.71 16.28 9.2 17.86 4.94 21.09 16.65 35.49 33.64 85.3 56.42
17.43 21.95 25.28 31.39 34.49 36.53 54.1 47.78 49.69 46.09 33.14 28.38 14.33 24.17 24.81 18.06 26.64 28.2 23.69 1.08 4.26 17.07 19.26 13.68 6.08 6.57 12.3 13.11 46.62 42.4 95.91 67.15
3.46 1.64 2.56 3.92 10.37 9.44 11.22 12.29 4.64 5.41 2.44 3.11 1.14 0.28 2.44 2.64 10.18 23.79 5.83 0.0 2.15 1.45 6.28 5.13 3.29 2.56 10.08 6.97 11.51 11.61 11.13 7.35
2.19 1.9 4.93 3.03 5.95 3.92 9.74 8.51 4.91 3.57 2.85 3.1 0.89 0.95 1.89 1.7 5.88 14.89 3.11 0.0 0.0 2.87 5.45 3.58 0.0 1.51 6.74 1.15 7.84 6.96 12.29 7.71
4.25 3.53 1.8 5.21 7.6 9.98 14.24 11.25 8.37 14.29 8.77 5.71 4.27 0.8 1.27 6.25 10.95 18.92 12.84 0.0 0.0 0.0 9.19 8.29 4.17 4.05 4.83 7.65 16.42 17.08 16.44 10.6
13.9 9.96 12.01 18.82 10.43 18.27 20.97 26.9 14.38 12.2 12.92 18.49 18.52 5.93 12.5 14.06 16.92 24.43 18.36 5.15 0.0 0.0 21.83 15.21 0.0 5.43 8.43 10.49 19.31 21.27 19.39 20.14
Smo115258 (OTP84)
 0.19 0.0 0.0 0.74 1.02 2.72 4.18 1.81 1.4 0.9 0.33 0.0 0.3 0.0 0.11 0.31 0.77 3.33 0.83 0.0 0.0 0.0 0.71 0.41 2.07 1.17 1.47 1.73 1.63 1.31 0.73 0.42
Smo115449 (EMB2758)
 1.05 0.54 1.39 1.46 2.26 4.07 5.2 4.45 3.04 1.58 1.73 1.13 1.14 0.21 2.87 0.99 2.6 3.45 1.54 0.0 0.28 0.0 2.36 2.38 1.07 1.16 5.36 6.13 3.2 4.34 4.49 3.57
3.95 1.88 3.24 4.6 5.15 8.2 13.98 10.67 12.39 9.68 6.46 4.13 1.85 1.44 3.74 2.64 8.13 5.42 6.55 0.0 1.23 6.66 4.16 2.93 1.07 2.16 8.87 11.09 10.29 9.23 10.62 9.36
1.8 1.76 0.3 0.44 0.8 3.11 3.09 6.97 3.81 2.9 1.94 2.36 1.28 0.35 3.6 2.43 2.08 4.58 2.35 0.0 0.0 0.0 2.63 1.16 1.43 1.66 4.59 4.77 3.48 4.2 6.72 5.68
1.24 1.15 0.48 0.82 1.1 5.04 3.58 3.17 2.85 2.7 1.1 1.28 0.61 0.37 2.01 1.09 2.56 2.62 2.26 0.3 0.0 1.56 2.25 2.03 0.87 1.89 5.73 4.7 4.37 4.15 2.96 2.62
2.12 1.4 0.99 2.13 2.14 3.61 3.65 4.41 5.46 4.49 3.41 3.15 0.68 0.36 2.26 1.11 2.72 2.62 2.45 0.26 0.0 0.09 2.5 2.2 0.56 1.49 3.52 2.76 3.41 3.69 6.6 5.2
2.42 1.42 2.46 2.05 2.86 2.34 5.73 5.37 5.81 5.64 3.47 3.39 0.56 0.59 1.27 0.73 3.6 1.94 2.0 0.04 1.81 0.0 1.85 1.49 0.23 2.32 3.53 4.3 4.04 3.37 7.36 5.68
3.48 0.75 1.84 2.47 4.38 6.76 8.8 7.2 5.93 4.69 6.97 5.89 1.29 0.34 2.82 3.14 5.6 7.32 5.8 0.0 2.36 0.0 4.54 3.1 0.96 2.68 4.69 5.82 8.67 7.86 10.26 8.96
Smo133790 (OTP84)
 6.2 4.89 3.93 6.13 9.84 12.43 16.52 12.92 15.47 11.53 6.99 7.54 3.39 1.57 5.73 4.79 8.9 12.61 10.18 0.0 0.79 0.31 7.1 6.13 5.32 6.22 17.6 11.8 10.28 10.93 11.61 10.87
0.31 0.74 0.55 0.67 1.66 2.01 1.07 1.37 1.18 0.97 2.06 1.32 0.98 0.22 0.89 0.96 1.5 2.47 1.77 0.0 0.26 0.0 2.06 1.36 1.32 0.97 1.45 1.57 2.99 3.15 3.31 2.33
Smo137492 (EMB175)
 1.17 1.0 2.87 2.67 2.95 6.24 9.44 7.57 8.12 4.22 4.47 2.98 0.47 0.45 3.48 1.33 3.87 9.14 2.45 0.0 0.0 3.56 4.99 2.97 0.0 2.94 6.27 0.92 7.11 6.99 10.83 9.49
5.3 2.6 2.87 3.06 5.04 5.47 8.97 8.98 7.37 9.78 7.04 5.82 1.54 0.71 2.84 2.74 4.08 5.46 4.01 0.44 5.05 1.15 3.04 3.39 0.74 2.1 2.15 1.58 6.23 6.1 11.41 10.34
11.4 2.28 2.21 5.6 2.85 4.74 11.55 16.5 7.49 8.0 3.83 7.05 6.08 0.5 5.43 6.95 9.92 15.64 13.52 0.0 0.0 0.0 11.05 9.91 0.0 2.52 2.71 2.73 15.4 14.44 20.44 15.57
4.42 2.93 4.4 4.16 5.56 8.94 11.91 16.14 14.03 10.3 6.61 5.59 4.77 2.48 8.74 5.33 13.89 11.34 9.82 2.58 1.19 2.31 9.8 8.1 1.36 6.42 15.76 13.12 16.98 16.28 19.53 18.15
5.03 2.59 2.78 5.5 5.49 11.55 12.26 10.48 10.72 8.08 5.37 6.26 3.25 1.04 6.41 5.39 8.92 8.7 9.29 0.11 1.3 0.96 7.98 6.32 0.88 4.85 12.1 8.96 14.13 12.04 9.89 9.71
1.7 0.53 1.67 1.39 1.99 3.36 5.15 5.21 2.09 3.44 1.69 1.44 0.9 0.45 1.46 1.07 3.39 2.91 3.04 0.0 0.0 0.0 1.5 1.57 0.0 2.02 4.43 5.89 4.68 4.27 4.19 2.85
2.31 5.54 4.31 6.1 5.78 13.83 10.6 13.49 7.42 9.39 4.69 1.46 1.14 0.38 4.58 1.45 8.22 28.48 5.7 0.0 3.97 2.37 5.47 4.11 1.68 10.16 15.44 22.74 13.82 6.33 8.77 7.23
Smo29563 (OBP4)
 198.54 158.77 197.5 161.12 211.18 134.5 106.47 84.68 95.51 70.03 84.94 81.55 22.72 22.85 16.52 82.27 193.03 365.25 168.67 0.0 0.0 0.0 288.58 210.29 0.0 24.87 74.83 45.46 261.75 272.46 364.23 303.29
Smo30076 (MEF21)
 3.01 2.16 2.19 3.29 5.32 5.09 8.31 5.62 8.31 6.25 4.94 3.49 2.8 1.07 4.23 2.6 4.86 5.61 4.07 0.0 0.0 0.14 5.11 3.9 1.58 3.39 7.21 4.76 5.17 5.94 6.52 5.5
59.49 37.25 65.61 47.21 88.71 58.76 45.74 41.72 43.84 26.22 50.43 30.5 36.0 23.83 28.75 40.48 112.3 150.9 46.32 0.0 0.0 0.0 60.63 39.81 0.0 4.43 13.06 19.94 100.54 96.93 90.38 97.27
0.86 1.22 1.5 0.67 1.84 2.87 4.6 3.5 4.57 2.27 2.82 1.66 0.12 0.0 0.43 0.4 3.34 7.73 1.84 0.0 0.0 0.0 2.34 0.92 0.0 0.0 0.0 0.0 5.43 3.37 7.69 4.37
0.62 0.51 0.27 0.53 1.23 2.95 1.88 2.77 3.89 1.39 1.79 0.86 0.81 0.0 0.93 1.07 2.67 3.67 1.54 0.08 0.0 0.0 1.62 1.33 0.0 0.9 3.95 3.04 3.24 2.6 2.7 1.49
0.09 0.23 0.29 0.27 0.0 0.81 1.19 0.88 0.52 0.2 0.46 0.0 0.0 0.12 0.63 0.0 0.81 2.28 0.86 0.0 0.0 0.0 0.48 0.1 0.0 0.54 1.33 1.82 1.46 1.23 0.33 0.0
0.16 0.15 0.0 0.28 0.74 0.44 0.77 0.93 0.51 1.12 0.08 0.31 0.5 0.0 0.39 0.24 1.11 1.84 0.79 0.7 0.43 0.25 0.66 0.66 0.65 0.0 0.41 0.4 1.62 1.6 2.02 1.06
2.9 2.2 3.2 4.23 6.96 4.77 6.37 8.85 14.26 14.02 11.36 7.86 2.42 1.7 2.45 1.67 11.01 8.76 0.92 1.94 2.76 1.78 1.18 0.75 3.73 5.02 3.78 2.47 10.34 10.18 16.63 12.3
0.83 0.79 0.37 0.65 0.08 3.2 2.7 3.07 2.17 1.03 0.52 0.74 0.9 0.15 0.77 0.51 2.07 4.58 1.27 0.0 0.0 0.0 1.78 0.75 0.0 0.33 1.66 0.77 2.87 2.76 2.65 1.46
5.87 2.84 3.1 4.76 8.46 12.5 16.68 12.22 15.26 10.0 8.48 5.68 4.62 1.45 5.69 3.61 7.72 12.21 9.73 2.42 3.16 1.09 8.83 8.26 2.02 5.62 11.63 12.73 12.99 14.3 15.16 12.05
0.02 0.0 0.0 0.0 0.03 0.13 0.15 0.11 0.12 0.14 0.0 0.0 0.0 0.05 0.1 0.0 0.05 0.35 0.25 0.0 0.0 0.0 0.02 0.03 0.0 0.31 0.26 0.12 0.1 0.03 0.12 0.0
15.7 18.45 20.74 24.0 22.91 22.33 27.72 25.7 26.6 24.85 22.2 16.34 6.75 20.54 13.82 9.73 23.76 14.93 16.28 2.27 7.24 3.32 21.82 16.48 5.93 13.15 22.33 22.27 23.48 23.58 47.88 29.06
6.31 5.86 5.15 7.58 7.22 18.6 23.97 18.53 21.07 8.51 11.78 7.39 2.04 0.37 3.28 1.51 9.35 20.23 3.6 0.0 0.0 0.0 4.57 4.09 2.27 2.73 8.13 6.04 15.01 12.35 16.86 10.57
0.38 0.0 0.41 0.17 0.79 3.28 3.21 2.32 0.83 0.9 1.06 0.56 0.14 0.25 1.07 0.37 1.49 1.23 1.47 0.0 0.0 0.0 1.48 0.88 0.85 0.73 1.87 1.39 1.39 1.82 1.4 1.24
4.5 1.2 0.51 1.71 1.87 11.51 6.29 12.23 4.92 5.42 5.68 3.1 2.39 0.66 2.1 2.88 8.8 20.96 20.68 0.0 0.0 0.0 4.19 5.68 2.53 1.46 5.18 4.24 12.36 11.46 7.53 8.47
Smo70094 (CLB19)
 2.2 0.77 0.98 2.15 2.28 6.55 5.93 5.93 3.9 2.4 2.29 1.61 0.89 0.4 1.97 1.03 4.96 7.13 2.87 2.83 0.2 0.73 2.23 2.67 1.81 0.65 3.57 2.65 5.29 6.37 8.25 5.09
3.81 1.52 3.71 6.45 8.19 15.19 13.35 17.39 13.63 9.01 8.92 5.56 13.35 3.71 4.57 7.63 9.99 23.4 13.43 0.17 2.6 0.0 7.76 6.48 2.24 5.16 6.35 5.98 15.41 13.86 15.24 14.13
0.95 0.43 0.08 0.68 1.23 2.4 1.77 4.25 3.96 2.0 1.29 0.79 0.23 0.21 1.55 0.25 1.33 4.4 1.15 0.45 2.3 0.81 1.22 1.38 2.89 0.92 3.49 2.56 2.98 2.45 1.46 0.9
1.44 1.63 0.63 1.2 1.54 3.38 4.68 4.93 5.0 3.23 2.01 2.13 1.06 1.06 4.37 2.19 3.73 5.88 3.32 1.4 0.0 0.0 3.57 2.53 0.39 1.88 6.75 7.62 6.33 5.73 6.06 4.2
3.88 2.8 2.66 2.07 7.12 4.51 6.7 9.29 6.4 7.1 5.53 3.91 2.4 1.1 3.24 3.59 4.05 5.02 5.31 0.23 2.72 0.0 4.75 4.5 0.39 5.33 7.52 3.64 6.25 6.54 17.33 10.83
2.36 1.97 1.18 1.92 4.37 4.83 4.7 6.53 2.59 3.24 2.75 1.86 1.74 1.02 2.44 1.74 2.27 5.92 2.37 0.56 1.79 1.93 2.59 2.01 7.13 1.84 5.67 7.23 3.03 3.79 3.63 2.71
1.49 0.57 1.73 2.8 2.61 5.37 8.04 4.27 8.34 4.72 3.08 1.7 3.97 0.45 2.24 2.55 5.25 8.31 5.12 0.0 0.41 2.88 5.71 4.35 2.48 4.53 6.34 7.14 10.62 9.59 8.94 7.37
1.95 1.96 1.27 2.13 4.65 3.91 5.22 4.2 4.29 4.53 1.68 2.12 2.67 0.4 3.21 2.46 6.43 7.84 5.41 0.0 0.18 0.43 5.72 4.67 3.78 1.83 5.23 3.76 6.91 6.03 9.37 6.55
1.42 0.81 0.79 1.36 2.23 3.36 5.57 3.67 4.24 3.03 2.7 2.24 1.27 0.92 1.23 1.94 3.87 5.56 4.12 1.32 0.28 4.94 2.97 2.28 1.53 1.44 3.64 4.59 6.23 5.54 5.23 3.16
Smo72439 (REME1)
 0.63 0.12 0.11 0.29 0.48 2.64 2.55 2.11 1.18 1.83 1.13 1.31 0.37 0.54 0.52 0.53 2.04 4.44 1.47 0.15 0.18 0.0 2.17 1.53 0.3 0.3 0.53 1.35 4.06 2.81 3.38 1.36
4.73 5.08 3.09 3.32 9.72 15.03 11.56 10.42 9.76 7.88 6.61 6.11 3.68 1.26 4.44 5.31 10.78 19.76 9.17 0.0 1.24 1.53 10.01 7.61 3.87 1.92 7.52 7.89 19.12 18.86 15.61 12.0
106.37 126.22 155.73 137.82 149.86 188.37 165.97 145.49 220.96 200.42 190.0 152.31 46.99 86.0 150.5 109.09 361.46 263.66 57.14 0.0 13.11 4.55 155.28 117.83 12.21 34.8 74.91 72.15 303.64 316.62 361.09 199.07
2.62 2.4 3.62 2.88 2.21 4.55 4.25 5.12 4.41 5.28 1.8 1.81 1.69 0.66 3.54 1.79 4.06 5.41 4.51 0.68 1.38 1.57 3.41 2.45 1.91 1.13 3.1 3.6 5.06 4.38 4.46 5.48
0.64 0.23 0.47 0.72 0.68 2.32 2.7 2.17 1.35 0.94 0.37 0.35 0.54 0.31 1.44 0.95 1.84 2.01 1.74 0.4 0.0 0.0 1.8 0.92 0.79 0.87 2.25 3.23 2.5 3.21 3.4 2.54
0.87 0.38 0.66 1.17 1.73 2.84 1.82 2.69 3.44 1.97 1.09 0.9 0.99 0.39 1.49 0.9 1.78 1.3 1.4 0.0 0.0 0.0 1.41 1.69 0.49 1.31 4.11 1.48 2.31 2.76 0.96 0.81
2.7 0.76 1.95 1.65 2.79 6.26 5.49 8.72 4.47 3.06 2.99 2.9 1.17 1.22 3.0 2.77 4.6 5.71 7.36 0.0 0.0 0.0 6.33 3.65 0.0 0.0 4.85 3.07 11.59 7.63 13.92 9.68
1.47 2.38 1.2 2.16 4.31 10.26 10.07 14.33 10.15 8.82 6.03 4.25 2.27 0.8 3.67 2.64 7.35 16.61 5.67 9.82 6.99 2.71 6.11 4.95 15.87 3.38 6.14 6.75 11.78 12.58 12.23 7.53
9.4 5.7 7.88 7.11 12.44 20.84 28.36 30.28 32.85 22.06 10.51 11.27 1.7 2.46 6.87 2.92 23.64 23.79 12.99 20.49 24.25 35.09 13.85 11.59 16.27 10.03 23.51 33.45 31.82 32.47 14.88 8.19
3.71 3.34 1.16 2.59 5.29 6.09 6.31 6.46 5.26 4.07 7.36 3.8 6.22 1.49 3.91 5.7 4.77 3.31 6.62 0.46 0.0 0.0 6.82 5.73 0.0 2.36 3.91 2.52 6.59 6.05 7.99 7.91
4.93 12.03 5.27 6.14 9.32 14.73 11.34 10.77 4.42 4.17 14.42 3.75 6.06 4.54 10.77 12.01 11.8 31.57 13.16 0.0 0.0 0.0 17.9 14.56 0.0 10.34 10.66 16.4 15.8 15.96 6.22 8.7
10.62 8.49 8.18 9.61 15.51 13.18 16.21 14.71 15.31 14.41 10.75 10.88 5.96 5.46 10.47 7.12 17.91 26.87 12.08 1.68 15.61 5.88 15.22 11.85 5.44 7.77 13.36 18.24 21.57 17.06 18.05 16.67
84.29 118.16 135.82 221.59 318.34 503.09 367.01 253.53 149.09 123.23 91.36 73.54 97.22 31.75 28.78 140.11 206.95 518.38 147.39 128.18 302.88 299.14 260.06 190.03 93.69 72.99 108.88 96.03 127.26 121.91 81.31 88.28

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)