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Heatmap: Cluster_3 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-0.34 1.16 -0.18 -3.35
0.51 1.25 -2.34 -
0.02 1.46 -2.08 -
- 2.0 - -
- 1.97 -3.77 -
-0.81 1.7 -2.44 -
0.46 1.32 -3.66 -4.6
-1.59 1.48 -0.43 -2.77
0.15 0.49 -0.69 -0.21
0.46 1.04 -0.82 -
-0.19 1.6 -4.27 -4.82
0.45 1.31 -3.11 -5.06
0.47 1.33 -4.5 -3.95
-1.34 1.85 - -
- 2.0 - -
0.12 1.02 -0.37 -3.07
0.55 0.59 -0.6 -1.42
0.15 1.32 -2.01 -2.7
Pnu_g01340 (ECA3)
 0.38 1.24 -2.02 -3.67
-2.41 1.93 - -
-1.32 1.64 - -1.08
0.04 0.2 -0.07 -0.2
0.74 1.0 -1.74 -5.42
0.25 1.49 - -9.25
0.43 1.1 -1.19 -4.05
0.01 0.97 -0.04 -4.04
0.32 1.18 -1.15 -4.86
0.99 0.57 -1.35 -2.8
Pnu_g01909 (LOS1)
 -0.3 0.76 0.51 -3.84
- 2.0 - -
0.58 1.0 -1.06 -5.15
-0.09 0.94 0.08 -3.6
0.39 1.36 -5.3 -3.28
0.12 1.1 -0.58 -3.28
0.52 1.31 -4.78 -4.48
0.61 0.93 -0.82 -30.87
0.13 0.67 0.35 -4.95
0.5 0.81 -0.33 -4.9
0.5 1.17 -1.93 -3.73
0.18 1.43 -2.57 -
0.45 1.28 -3.47 -3.08
-0.31 1.28 -0.51 -4.2
0.68 1.02 -1.94 -3.3
-0.05 1.19 -0.66 -3.14
0.32 1.25 -1.57 -4.88
0.09 0.92 -0.07 -3.51
0.4 1.01 -0.75 -3.79
0.1 0.58 -0.52 -0.44
0.5 1.05 -1.45 -2.72
Pnu_g03357 (CAB4)
 0.49 0.7 -0.04 -
0.2 1.0 -0.36 -3.92
Pnu_g03686 (AGT)
 0.04 0.76 -0.38 -0.97
0.24 0.88 -0.1 -4.46
0.33 0.94 -0.4 -3.73
0.09 1.16 -0.76 -3.09
0.02 1.45 -2.48 -3.86
0.47 0.89 -0.43 -5.34
-0.01 0.8 0.26 -3.67
0.05 0.91 0.05 -4.37
0.28 0.76 -0.11 -2.62
0.36 0.74 -0.4 -1.81
0.25 0.94 -0.6 -2.08
0.74 0.98 -2.14 -2.97
0.31 1.38 -4.93 -3.07
-3.63 1.52 -1.57 -0.49
0.18 0.76 0.06 -2.99
0.21 1.12 -0.76 -3.74
- 2.0 - -
0.44 1.4 - -
0.48 1.27 -2.33 -
0.3 1.09 -0.96 -2.94
-0.1 1.25 -4.18 -0.68
-0.84 1.73 -3.3 -6.26
1.03 0.86 -3.24 -4.75
-0.25 1.43 - -1.12
-0.0 1.22 - -0.58
0.4 0.71 0.06 -
0.11 1.24 -1.09 -3.58
0.18 0.33 -0.33 -0.3
- 2.0 - -
-0.68 1.75 - -
-0.02 1.22 -0.84 -2.99
0.75 1.04 -3.54 -2.52
0.68 1.1 -3.17 -2.74
- 2.0 - -
-0.14 1.45 -1.88 -3.41
-0.55 0.89 0.34 -2.33
Pnu_g08345 (CAC3)
 0.13 0.29 -0.45 -0.07
0.11 0.6 -0.18 -0.93
0.22 1.34 -1.87 -5.06
0.27 1.48 - -
0.59 1.09 -1.44 -
Pnu_g09040 (BGLU40)
 -0.13 1.24 -6.14 -0.49
-0.28 1.03 0.09 -3.82
0.69 0.41 -0.76 -1.1
0.15 0.32 -0.43 -0.16
-0.63 1.75 - -
1.03 0.53 -2.36 -1.65
0.19 1.36 -1.86 -5.78
0.38 0.89 -0.54 -2.69
0.48 1.24 -2.08 -
0.61 1.27 -6.86 -4.35
0.76 0.87 -1.47 -3.06
-0.42 0.93 0.27 -2.73
-0.07 0.78 0.26 -2.93
0.53 1.27 - -2.83
0.28 0.74 -0.01 -2.97
-0.32 1.45 -1.49 -3.27
0.39 0.91 -0.74 -2.29
0.19 0.69 -1.41 -0.19
-0.66 1.35 -0.83 -1.97
0.45 1.01 -0.98 -3.05
- 2.0 - -
0.32 0.91 -0.31 -3.96
0.2 0.69 -0.84 -0.56
- 1.92 -3.25 -3.27
0.39 1.43 - -
Pnu_g13396 (VPS33)
 0.0 0.09 -0.05 -0.04
0.0 0.78 0.1 -2.27
-0.41 1.0 0.09 -2.46
0.71 1.18 -4.25 -4.72
0.22 1.37 -2.28 -4.39
-0.54 1.72 -5.29 -
0.27 0.6 -0.46 -0.85
-0.31 1.21 -0.5 -2.53
-1.56 1.69 -2.57 -1.96
0.21 1.4 -2.91 -3.77
0.34 0.73 -0.53 -1.37
Pnu_g17865 (REME1)
 0.18 0.21 -0.28 -0.17
Pnu_g18783 (BAT1)
 0.37 0.45 -0.2 -1.08
-0.21 0.59 0.03 -0.73
-0.08 0.21 -0.01 -0.13
0.34 0.45 -0.49 -0.61
0.24 0.44 0.39 -2.73
0.14 1.02 -0.89 -1.62
0.3 1.32 -2.08 -4.59
0.16 1.09 -0.54 -3.95
0.59 1.11 -1.7 -5.09
0.33 0.85 -0.08 -
-0.23 0.72 0.42 -2.69
-0.11 0.48 -0.35 -0.16
0.48 1.1 -1.23 -4.85
0.53 0.81 -0.96 -1.83
-2.04 1.24 0.11 -1.66
0.99 0.38 -0.49 -
1.0 0.92 -3.46 -6.97
0.67 1.05 -1.67 -5.12
0.37 1.44 - -
-0.48 1.63 - -2.36
0.69 1.19 -3.25 -
0.45 1.29 -2.46 -
0.49 1.24 -3.26 -2.91
0.39 1.35 -3.82 -3.81
0.57 1.19 -2.76 -3.73
0.5 0.91 -0.57 -4.71
0.52 0.79 -0.76 -2.03
0.14 0.88 0.02 -4.51
0.63 0.74 -2.07 -0.86
0.27 1.11 -1.04 -2.74
Pnu_g29936 (HSP83)
 0.67 0.42 -0.25 -2.11
0.61 0.88 -0.66 -
Pnu_g30080 (SBPASE)
 0.74 0.78 -0.88 -4.08
0.34 0.73 -1.38 -0.53
0.15 0.41 -0.44 -0.27
0.15 1.15 -0.94 -2.68
-0.37 1.26 -0.47 -3.26
-0.56 1.67 -2.8 -
0.01 0.2 -0.1 -0.14
0.76 0.95 -2.26 -2.59
0.71 1.04 -2.14 -3.65
0.24 0.89 -0.11 -4.83
0.06 1.33 -1.36 -4.17
Pnu_g31905 (MPK10)
 0.04 0.44 -0.37 -0.26
0.13 0.76 0.08 -2.68
0.48 0.68 -0.06 -4.37
0.71 1.12 -4.06 -2.93
0.06 0.43 -0.2 -0.43
0.12 0.79 0.04 -2.72
0.36 1.21 -1.42 -5.03
0.32 0.58 -0.32 -1.15
0.78 0.36 -0.52 -1.74
0.07 1.32 -1.42 -3.88
-0.6 1.62 -3.78 -2.39
-0.1 1.26 -1.07 -2.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.