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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
-0.73 | -1.26 | - | - | - | - | - | -3.65 | -5.08 | 0.01 | -2.77 | - | -2.45 | - | -3.9 | - | - | - | 0.92 | - | -2.64 | 0.13 | -2.64 | -0.17 | -0.81 | -2.46 | -2.65 | -0.43 | -2.89 | -0.21 | 1.32 | 0.78 | 1.52 | 1.3 | 1.33 | 0.88 | 0.32 | 0.62 | 0.79 | 0.98 | 0.96 | 1.12 | - | - | -3.72 | 0.15 | 0.62 | -4.0 | -4.04 | 0.77 | 1.74 | 1.96 | 1.27 | 0.33 | 2.72 | -3.56 | |
-4.53 | - | - | -5.01 | - | - | - | -0.92 | -3.52 | -1.04 | - | -2.44 | -3.24 | -2.47 | -5.7 | - | - | -1.81 | -1.51 | -0.21 | -2.44 | -1.4 | -1.63 | -1.75 | -0.44 | -1.26 | -0.54 | -0.97 | -0.16 | -0.2 | 1.23 | 1.42 | 1.37 | 1.55 | 1.14 | -0.01 | 0.57 | 1.61 | 0.8 | 1.0 | 0.84 | 0.2 | -3.08 | -5.47 | -3.92 | -3.1 | -1.35 | -0.72 | -0.52 | 0.54 | 2.09 | 1.94 | 0.39 | -0.09 | 3.12 | -4.42 | |
-0.34 | -0.78 | -0.97 | -1.69 | 0.04 | -0.73 | - | 0.41 | -7.13 | - | -2.75 | -3.37 | -3.34 | -2.48 | -1.49 | - | - | -2.75 | - | -3.63 | -0.99 | -2.61 | -2.57 | -0.1 | -1.74 | 0.04 | 0.01 | -0.69 | -0.82 | -0.73 | 0.8 | 0.68 | 0.59 | 0.98 | 0.32 | 0.6 | 0.3 | 0.85 | 0.75 | 0.35 | 1.19 | 0.93 | - | - | - | 0.01 | 0.32 | - | - | 1.32 | 2.06 | 2.14 | 1.25 | 0.94 | 2.68 | -3.52 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.