View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.39 | 0.27 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.05 | 0.02 | 0.66 | 0.1 | 0.0 | 0.12 | 0.0 | 0.04 | 0.0 | 0.0 | 0.0 | 1.23 | 0.0 | 0.11 | 0.72 | 0.11 | 0.58 | 0.37 | 0.12 | 0.1 | 0.48 | 0.09 | 0.57 | 1.64 | 1.12 | 1.87 | 1.61 | 1.65 | 1.21 | 0.82 | 1.01 | 1.13 | 1.29 | 1.27 | 1.42 | 0.0 | 0.0 | 0.05 | 0.73 | 1.0 | 0.04 | 0.04 | 1.12 | 2.18 | 2.55 | 1.58 | 0.82 | 4.32 | 0.06 | |
0.18 | 0.0 | 0.0 | 0.13 | 0.0 | 0.0 | 0.0 | 2.23 | 0.37 | 2.05 | 0.0 | 0.78 | 0.45 | 0.76 | 0.08 | 0.0 | 0.0 | 1.21 | 1.48 | 3.66 | 0.78 | 1.6 | 1.36 | 1.26 | 3.11 | 1.76 | 2.91 | 2.16 | 3.77 | 3.67 | 9.86 | 11.31 | 10.9 | 12.39 | 9.28 | 4.18 | 6.27 | 12.91 | 7.35 | 8.44 | 7.57 | 4.84 | 0.5 | 0.09 | 0.28 | 0.49 | 1.65 | 2.56 | 2.95 | 6.13 | 17.98 | 16.21 | 5.54 | 3.97 | 36.7 | 0.2 | |
4.48 | 3.32 | 2.9 | 1.76 | 5.83 | 3.43 | 0.0 | 7.57 | 0.04 | 0.0 | 0.85 | 0.55 | 0.56 | 1.02 | 2.03 | 0.0 | 0.0 | 0.85 | 0.0 | 0.46 | 2.87 | 0.93 | 0.96 | 5.29 | 1.7 | 5.84 | 5.72 | 3.53 | 3.22 | 3.44 | 9.9 | 9.1 | 8.54 | 11.22 | 7.09 | 8.65 | 7.0 | 10.27 | 9.55 | 7.23 | 13.0 | 10.85 | 0.0 | 0.0 | 0.0 | 5.74 | 7.11 | 0.0 | 0.0 | 14.16 | 23.73 | 25.01 | 13.54 | 10.91 | 36.37 | 0.5 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)