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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10434970g0020 (HMA1) | -1.98 | - | - | - | - | - | - | - | -6.46 | -2.75 | - | -0.83 | -1.21 | -2.51 | -1.12 | - | - | - | -4.03 | -3.07 | - | - | - | - | -2.19 | -1.71 | - | - | - | - | 1.47 | 1.99 | 2.72 | 1.46 | 2.55 | 1.95 | 2.35 | 2.37 | 2.12 | 2.1 | 2.17 | 1.64 | - | - | - | -3.09 | -1.93 | - | -5.85 | -3.09 | -2.12 | - | - | -3.34 | -2.98 | - |
| - | -0.69 | - | - | - | - | - | -1.41 | -5.66 | - | -2.35 | -1.59 | -2.32 | -1.18 | -1.22 | - | - | - | -3.06 | - | - | - | - | - | - | -3.89 | - | - | - | - | 1.45 | 1.83 | 2.36 | 2.49 | 1.32 | 1.46 | 1.9 | 2.67 | 3.07 | 1.34 | 2.39 | 1.95 | - | - | - | - | - | -5.1 | - | -2.7 | -2.07 | - | - | - | -2.16 | -3.79 | |
MA_171787g0010 (CSI1) | - | - | - | - | - | - | - | - | - | - | - | -0.16 | -0.6 | -0.27 | -0.65 | - | - | - | -5.7 | -1.98 | - | - | - | - | - | -2.19 | - | - | - | - | 1.78 | 1.57 | 2.26 | 2.57 | 2.38 | 2.26 | 1.59 | 2.85 | 2.26 | 1.93 | 1.41 | 1.63 | - | - | - | -3.17 | - | - | - | - | -1.47 | - | -3.41 | -3.42 | -3.01 | - |
MA_35652g0010 (CSI1) | - | - | - | - | - | - | - | -3.01 | - | 0.01 | - | -1.92 | -2.96 | - | -1.75 | - | - | - | -0.62 | - | -2.11 | -1.54 | - | - | - | -1.76 | - | - | - | - | 1.42 | 1.85 | 2.52 | 2.31 | 1.82 | 2.19 | 1.42 | 2.92 | 1.82 | 2.43 | 2.16 | 1.6 | -3.53 | -4.15 | -2.59 | -2.18 | - | - | -5.61 | - | -3.16 | -3.23 | -3.13 | - | - | - |
MA_406979g0010 (CSI1) | - | - | - | - | - | - | - | - | - | -2.07 | - | 0.61 | -0.41 | -1.31 | -0.04 | - | - | - | -1.74 | - | -2.38 | - | - | - | -2.55 | -2.16 | - | - | - | - | 1.5 | 1.8 | 2.45 | 2.65 | 2.13 | 2.08 | 1.9 | 2.69 | 1.6 | 1.96 | 1.44 | 1.97 | - | - | -2.86 | -3.45 | - | -6.06 | -5.88 | -3.17 | - | - | -3.55 | -2.64 | -2.25 | - |
| - | -2.75 | - | - | -3.92 | - | - | -1.58 | -2.46 | -2.67 | -2.42 | -7.54 | -2.49 | -2.45 | -3.46 | -2.69 | - | -0.74 | -3.5 | -1.79 | -2.56 | -2.95 | -0.24 | -3.26 | -0.89 | -2.32 | -0.09 | -0.7 | -2.21 | 0.72 | 1.21 | 1.58 | 1.74 | 2.01 | 1.48 | 1.87 | 1.77 | 2.58 | 2.13 | 1.46 | 2.09 | 1.48 | -2.65 | -3.09 | -2.01 | 0.97 | -3.73 | -1.92 | -1.9 | -0.83 | -0.99 | -3.06 | -2.72 | -1.13 | -1.84 | -4.21 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.