Heatmap: Cluster_135 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g01180.1 (LOC_Os01g01180)
-1.42 1.02 -3.9 -1.36 - - -2.64 -2.95 - -4.2 -1.71 -3.89 - -2.1 - - -1.47 -1.86 1.11 -3.22 - -4.5 -5.0 - -0.55 - - - - - - - - - - - - - - -4.27 -3.01 - - 5.31 - -2.37 -2.03 - 0.45
-6.24 -1.58 -7.93 -7.43 - 0.81 -3.6 -3.45 -4.75 - -5.03 - - -5.04 - - -6.76 - - -11.67 -8.94 - -7.18 -7.9 - - - -4.68 - - - -5.01 - - - - - - - -8.22 - -7.3 - 5.54 -5.29 - - - -
LOC_Os01g46390.1 (LOC_Os01g46390)
-5.41 -2.73 -2.58 -6.8 -6.16 0.0 -4.45 -5.36 -3.58 -4.91 -4.01 -5.72 -4.89 -2.72 - -3.39 -5.87 -5.42 - -3.7 -6.65 -6.98 -6.75 -7.04 - - - - - - - -5.35 - - -5.45 -5.55 -5.41 - -5.71 -7.08 -4.88 -7.15 -5.4 5.54 -3.21 -2.92 - - -5.34
-1.23 -3.48 -3.55 -4.6 -0.69 -4.04 -4.46 -5.04 -6.11 -7.31 -5.97 -6.19 -5.63 -4.84 -2.09 -1.99 -7.07 -7.98 -0.0 -3.74 -6.76 -5.52 -5.75 -7.49 -3.46 -6.47 -6.52 - - -7.07 - -6.23 - - -7.24 -7.34 - - - -7.51 -7.18 -7.43 -7.31 5.49 -6.15 -4.03 -2.32 -1.58 -3.31
LOC_Os01g50490.1 (CYP706A5)
-8.48 -3.79 - 2.0 1.82 -1.74 -0.67 -1.12 - -6.04 -8.34 - -5.05 -5.64 - - -8.2 - - -8.0 -9.87 - - - - - - - - - - -7.47 - - - - - - - - -10.51 - - 5.32 -6.19 - - -6.53 -
-6.17 -2.74 - -2.96 -1.52 -4.53 -7.63 -6.4 -5.51 -6.87 -6.66 -2.46 - - - - -9.47 -8.91 1.1 -10.15 - -8.14 - -9.22 - - -6.15 - - - - - - - - - - - - - - - - 5.24 1.51 0.23 1.99 -2.67 -5.8
LOC_Os01g57390.1 (LOC_Os01g57390)
-3.95 -2.23 - - - - -4.65 -5.03 -4.07 -3.95 -5.55 -6.1 -3.71 -4.68 -3.33 - -2.58 -4.98 - -7.34 -7.93 - -7.9 - - - - - - - - - - - - - - - - - - - - 5.58 - -3.15 - - -4.3
LOC_Os01g64850.1 (LOC_Os01g64850)
-5.51 0.33 -6.29 - - - - -4.32 -3.62 -1.58 -1.13 -5.23 - -4.79 - - - - - -6.06 - - - - - - - - - - - - - - - - - - - - - - - 5.54 - - -4.07 -3.17 -
LOC_Os02g12230.1 (LOC_Os02g12230)
- -2.34 - - - -0.02 - -5.19 - - -4.69 -3.42 - - - - - -7.77 - -2.86 - - - - - - - - - - - -2.89 - - - - - - - - - - - 5.55 -1.4 -1.81 - - -
LOC_Os02g44850.1 (LOC_Os02g44850)
-4.42 -1.37 -6.94 - - -4.02 -6.63 -5.53 -5.26 -4.45 -1.85 -3.38 -4.1 -2.51 - - -3.58 -3.27 -2.14 -5.71 -7.57 - - -8.88 - -3.74 - - - -3.16 -5.27 -2.97 - - - -5.02 - -4.47 - - -8.13 - - 5.52 -5.3 -3.65 -0.73 -1.71 -3.38
LOC_Os03g38600.1 (LOC_Os03g38600)
-6.33 -3.03 -7.6 - - - -4.54 -4.34 -3.89 -5.79 -6.08 -1.94 -2.43 -3.17 - -2.26 - -4.1 2.06 -0.19 -7.1 -4.54 -6.15 -5.42 -3.2 -4.75 -4.02 - - - - -6.35 - - -5.36 - - - - -6.03 -8.81 -6.97 -7.98 5.38 -0.98 -2.16 - - -
LOC_Os03g57740.1 (LOC_Os03g57740)
- -1.42 - -3.53 - - - - -3.91 -5.63 -2.97 - - - - - -4.59 -5.27 - -9.12 - - - - - - - - - - - - - - - - - - - - - - - 5.59 - - - - -
LOC_Os04g04750.1 (LOC_Os04g04750)
-7.9 -3.57 -7.07 - - - - -5.83 - - -12.09 - - -7.11 - - - -8.81 - -11.7 - - - - - -5.51 - - - - - - - - - - - - - - - - - 5.61 -5.19 -4.74 - - -
-9.9 -3.1 - - - - - -5.51 -7.49 -8.43 -11.62 -7.42 - - - -4.83 - - - -6.79 - -9.39 - -9.2 - - - - - - - -5.3 - - - - - - - - - - -8.62 5.61 - - - - -
-3.76 -0.72 - - - - - - -6.89 - -7.26 - - - - - - - - -9.48 - - -8.61 - - - - - - - - - - - - - - - - - - - - 5.59 - - - - -
LOC_Os04g47390.1 (LOC_Os04g47390)
-3.9 -0.85 -5.72 -3.87 -3.24 2.12 -1.02 -1.41 -4.84 -5.31 -3.72 -5.8 - -5.18 - - - -6.05 - -8.43 - -6.39 - - - - - - - - - -6.09 - - - - - - - - - - - 5.37 -0.27 -1.28 - - -3.98
LOC_Os04g55070.1 (LOC_Os04g55070)
-3.01 -1.05 -5.72 - -2.01 - 0.5 0.17 -2.89 -2.5 -2.1 -4.07 -3.15 -3.23 -0.98 -3.3 -5.57 -2.69 - -3.53 -4.26 -2.72 -3.82 -2.76 -1.6 - -4.67 -4.44 - -2.69 -3.53 -2.71 - - -4.36 - -3.42 -4.67 -2.76 -4.68 -4.71 -6.61 -4.85 5.36 -1.65 -1.18 -2.07 -3.32 -
-4.6 -0.81 -4.01 -7.73 -4.36 1.32 -8.6 -5.7 -2.07 -3.4 -3.28 -1.47 -6.38 -3.86 - - -5.6 -2.89 -2.53 -5.8 - - -7.76 - - - - - - - - - - - - - - - - -8.84 - - -8.08 5.27 0.65 0.03 1.53 -1.53 -
LOC_Os05g22300.1 (LOC_Os05g22300)
-6.59 -1.94 - - - - -3.56 -4.1 - - -6.36 - - -2.25 - - - - - -6.56 -7.79 -8.67 - -7.49 - -5.31 - - - - - - - - -4.89 - - - - -7.28 -5.03 - - 5.59 - - - - -
LOC_Os05g49790.1 (LOC_Os05g49790)
-3.18 -1.57 - -6.4 - - -4.72 - - - -4.96 - - - - -1.66 - -6.26 - -8.43 -8.55 - - -6.6 - - - - - - - - - - - - - - - - -7.83 - - 5.58 -3.07 -5.1 -2.85 - -
LOC_Os06g05340.1 (LOC_Os06g05340)
-4.04 0.84 -3.35 -3.61 - - -2.19 -5.41 -2.25 -4.65 -3.15 -2.64 -3.11 -2.27 - - - -1.84 - -9.19 - - -6.3 - - -1.35 - - -2.25 - - -2.52 - - - - - - - - - - - 5.49 - - - - -
LOC_Os06g20120.1 (LOC_Os06g20120)
-4.52 0.34 - -3.96 - - -3.78 -4.16 -3.42 - -5.04 - - - - - - -6.64 - -6.94 - -7.42 - - -2.44 - - - - - - -4.54 - - - - - - - -7.12 - - - 5.56 - - - - -
LOC_Os06g20140.1 (LOC_Os06g20140)
-9.74 -2.82 -2.99 - - -7.43 -7.37 -6.61 -6.66 -8.34 -6.9 - -6.63 -7.48 - - - -7.98 - -6.81 - - - - - - - - - - - - - - - - - - - - -10.3 - - 5.6 -5.99 - -4.17 - -
LOC_Os06g40070.1 (LOC_Os06g40070)
-1.84 -2.18 0.21 -6.04 -2.4 -0.46 1.09 -2.05 -3.04 -2.29 -1.19 -4.75 -3.95 -3.36 - - -5.49 -2.35 - -9.42 -9.37 -10.7 - - -4.37 - -6.81 -6.66 - -5.42 - -6.99 - - - - - - - - -8.05 -9.29 - 5.36 0.23 -1.54 -3.97 -7.15 -6.47
LOC_Os07g07170.1 (LOC_Os07g07170)
-3.08 0.12 -3.22 - 0.65 -0.02 -3.43 - - -3.67 -3.04 - - - - - - - - -6.2 - - - - - - - - - - - - - - - - - - - - - - - 5.49 - - - - -
-0.08 -1.6 -3.68 -5.42 -2.27 -3.31 -1.32 -1.74 -2.95 -2.16 -2.51 -3.4 -2.37 -3.04 -4.7 -4.68 -2.3 -2.16 -1.39 -2.61 -4.96 -5.03 -4.35 -4.41 -2.58 -3.51 -1.17 -5.59 -5.25 - -5.1 -4.38 -4.06 -5.41 -3.68 - -5.71 -4.47 -3.51 -5.32 -3.92 -4.39 -3.66 5.39 -3.67 -3.39 -1.86 -2.97 -1.11
LOC_Os08g34249.1 (LOC_Os08g34249)
-5.63 -2.89 - - - - -0.86 -0.65 -3.3 -1.98 -3.71 - -4.21 -1.8 - - - -2.59 - -5.51 - - - - - -1.27 - - - - - - - - - - - - - - - - - 5.53 - - - - -
LOC_Os08g34258.1 (LOC_Os08g34258)
-5.63 -2.89 - - - - -0.86 -0.65 -3.3 -1.98 -3.71 - -4.21 -1.8 - - - -2.59 - -5.51 - - - - - -1.27 - - - - - - - - - - - - - - - - - 5.53 - - - - -
-2.85 -0.42 -1.1 0.13 -2.39 -3.54 0.22 0.88 -1.82 -4.36 -2.0 -6.8 -0.91 -1.09 - - -6.24 -1.27 - -1.25 -2.85 -8.16 -3.08 -7.03 - -3.43 -5.35 -4.97 -3.62 -2.33 - -2.36 -3.5 - - -4.22 -3.5 -5.43 -3.06 -2.95 -1.54 -1.94 -1.63 5.16 - - 0.14 0.64 -3.27
LOC_Os09g39090.1 (LOC_Os09g39090)
-6.13 -0.38 - - - - -3.76 -3.93 -4.2 -1.91 -5.8 - - - - - - -4.75 - -6.4 - - - - - - - - - - - - - - - - - - - - - - - 5.57 -2.42 - - - -
LOC_Os09g39100.1 (LOC_Os09g39100)
-3.41 -0.23 - - -4.09 - - -3.71 -2.71 - -8.44 - - - - - -0.96 - - -9.17 - - - -5.4 - - - - - - - -3.5 - - - - - - - - - - - 5.55 - -2.36 - - -
-5.29 -2.61 -1.15 - - - -6.19 -4.16 -7.89 -5.01 -4.03 - -4.45 -0.83 - - -2.49 -6.28 - -6.94 -9.94 -7.38 -8.63 -9.13 - - - - - - - - - - - - - -6.36 - -9.87 -7.56 - -7.99 5.56 - - -4.46 -4.69 -4.94
-3.51 -2.62 -6.04 - - - -6.0 -5.11 -5.07 -6.65 -6.25 - -6.12 - - - -4.7 -7.14 - -10.73 - - -7.54 - - - - - - - - - - - - - - - - - - - - 5.6 - - - - -5.18
-4.76 -4.54 -5.6 -9.88 - -8.15 -2.84 -3.54 -3.99 -4.65 -2.99 -6.0 -5.11 -1.53 - -6.36 -2.77 -6.99 -1.52 -7.49 -11.16 -10.43 -7.38 -10.94 -5.3 - - -6.31 -6.96 - - -7.36 - -5.47 - -7.52 - -6.18 -7.72 -9.97 -8.36 -8.56 -9.35 5.55 -7.75 - -2.34 -3.21 -2.91
-9.09 -2.1 - -7.84 -2.54 -6.43 -8.04 -4.35 - -5.22 -7.49 -4.39 -6.73 - - - - - - -8.73 -9.58 - - - - - - - - -5.57 - - - - - - - - - - - - - 5.57 -0.9 -2.94 -1.95 - -
-7.72 -1.91 -6.81 -6.64 -7.77 -4.89 -8.65 - -7.24 -2.61 -1.32 -4.67 -5.5 - - - - - - -6.63 -8.17 - - - - - -5.61 - - - - - - - - -3.84 - - - - - - - 5.57 -2.61 -1.86 -3.76 - -3.65
LOC_Os10g34040.1 (LOC_Os10g34040)
-5.81 -1.95 -6.38 - - - -5.59 -6.32 -3.51 -8.88 -6.12 -4.58 1.31 0.22 -3.29 -2.68 -6.21 -4.01 -0.26 -0.85 -5.75 -5.04 -5.84 -5.99 -3.24 -3.66 -4.62 -5.2 - - - -4.7 -5.38 -5.02 - - -5.31 - - -4.0 -4.71 -4.1 -4.49 5.31 0.42 0.42 -2.57 - -
-5.14 0.55 -2.46 -5.23 - -1.2 -3.77 -3.5 - -3.75 -3.69 -0.38 -3.72 -3.69 - - - -4.49 - -2.97 -5.56 -5.18 -6.5 -4.16 - - -1.43 - - - - -2.79 - - - - - - - - -5.75 -2.81 -5.35 5.16 1.29 -0.66 1.88 0.98 -2.69
LOC_Os11g14080.1 (LOC_Os11g14080)
-5.21 -1.08 -1.5 -6.24 - - -1.85 -2.58 -2.28 -3.15 -5.08 -3.43 -2.77 -3.97 - - -3.98 -3.94 - -4.69 -5.49 -7.77 -6.62 -5.33 - -3.14 0.69 - - - - -3.5 - - - -3.93 - - - -4.97 -4.79 -3.19 -2.72 5.46 -2.25 -2.66 -3.01 - -
-3.29 0.42 - -5.67 -3.17 -2.93 -2.17 -2.9 - -2.62 -2.36 - -3.65 -3.7 - - 0.26 -5.01 - -4.92 -6.34 -6.83 - -6.0 - -3.54 -3.48 - - - -3.6 -5.24 - - -2.99 -1.75 - -3.55 -3.5 -5.33 -6.8 -4.16 -4.4 5.4 -2.77 -2.46 0.49 -2.27 -
-9.4 -6.48 -10.77 - - - -6.2 -5.31 -4.8 -5.99 -6.24 -0.05 - -7.92 - -7.41 -8.19 -9.8 -4.7 -8.42 -10.67 -10.32 - -9.45 - - - - - - - -7.65 - - - -7.53 - - -8.02 -11.94 -11.04 - - 5.48 1.15 0.05 -7.01 - -
LOC_Os12g01040.1 (EXO70H6)
-5.21 -1.36 -7.42 - - -6.37 -4.05 -2.4 -1.94 -4.47 -2.57 -2.67 -4.2 -1.39 -1.21 -2.76 -7.34 -3.36 - -2.82 -6.91 -5.65 -7.27 -8.14 - - - - - - - -5.25 - - - -4.9 - - - -8.79 -6.85 -7.66 -5.2 5.51 -1.12 -2.21 -3.38 -4.3 -
LOC_Os12g04350.1 (LOC_Os12g04350)
-5.01 0.93 - - - - - -4.86 - -5.1 -7.94 -3.79 -1.11 1.08 - - - - - -3.81 -5.1 - - - - - - - - - - -1.98 - - - - - - - -3.14 -5.56 - - 5.45 - - -1.76 - -
-3.28 -0.42 -6.93 - - -6.17 -2.46 -2.58 - -5.16 -4.75 -7.91 -3.44 -0.53 -7.24 - -5.64 -1.84 - -2.88 -5.59 -4.86 -6.18 -5.62 -0.74 - - -4.89 -3.68 -4.91 -4.58 -5.88 -5.12 -4.14 -5.55 -5.02 -5.57 -7.81 -5.02 -3.86 -3.67 -3.18 -2.75 5.29 -8.57 -2.82 2.23 -0.05 -8.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.