Heatmap: Cluster_62 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-2.03 -0.33 -7.8 -4.51 -5.08 -1.72 -0.7 -1.25 -4.59 -3.09 1.82 -6.4 -0.42 0.3 1.59 1.93 -1.55 -1.45 -2.16 2.26 -6.02 -6.62 -4.18 -6.22 -0.06 0.6 -3.1 -4.27 - -2.95 -5.01 -2.94 -5.86 -6.49 -6.93 -6.03 - -4.23 -4.33 -2.6 -3.78 -1.88 -2.28 4.53 -0.76 -1.03 -2.39 -3.74 -5.08
LOC_Os01g43740.1 (CYP72A13)
-5.84 -3.7 - -10.69 - -9.39 -5.07 -7.4 -5.08 -5.59 -4.19 3.6 -1.89 -3.35 -3.36 0.17 -11.21 -7.05 -1.0 0.19 -0.62 -1.61 -1.5 -2.64 4.26 -0.65 -0.31 -0.75 -0.93 -0.78 -0.96 0.44 -0.72 -0.05 -1.75 -1.11 -1.78 -0.96 -1.13 -0.12 -0.79 -2.57 -2.42 0.18 -1.25 -2.88 -1.63 -2.66 -4.14
-6.02 -1.96 - - -3.87 - 2.13 -5.9 -2.13 -1.25 0.12 1.79 1.12 1.97 -1.57 1.21 -3.94 1.83 -0.42 -1.04 -1.9 -1.38 -2.21 -1.77 0.16 -1.21 0.17 -2.6 -0.53 -0.07 -1.77 -1.02 -1.78 -2.2 -2.43 -0.96 -3.36 -2.37 -3.45 -3.64 -3.53 -4.53 -5.41 2.8 1.8 2.31 0.77 -3.1 -
-0.16 0.57 -0.6 -1.15 -1.98 -1.17 1.66 1.45 0.05 0.81 1.13 1.04 1.0 0.95 0.27 0.36 -0.31 0.58 1.39 0.9 -2.17 -2.57 -2.3 -2.52 -0.01 0.32 1.58 -2.9 -2.48 -2.44 -2.38 -1.33 -2.41 -2.7 -2.99 -1.86 -2.54 -2.1 -2.09 -3.15 -2.74 -2.79 -2.77 1.32 0.7 0.44 0.38 0.71 0.3
-8.55 -4.88 - -7.69 - - -0.24 -0.61 -5.09 -2.18 -2.89 0.8 2.55 2.93 0.21 0.75 -0.98 1.14 0.17 0.93 -5.43 -5.71 -3.54 -5.23 -2.48 -2.79 1.01 -4.9 -5.65 -7.21 -5.86 -3.65 -6.0 -4.42 -6.28 -5.9 -6.18 -4.76 -5.47 -3.23 -4.27 -1.54 -3.33 2.84 2.62 2.71 -4.49 - -
LOC_Os02g02650.1 (LOC_Os02g02650)
0.57 1.5 0.57 - - 0.32 0.84 0.33 -2.34 -1.49 -0.8 0.62 - -2.53 - - 1.2 0.2 2.33 -1.6 -2.66 -2.57 -2.21 -2.95 - - - - - - - -0.23 -1.48 - -0.19 -0.53 -1.41 - -1.7 -2.0 -1.82 -1.96 -1.23 3.45 1.91 0.83 1.35 0.01 0.89
-4.5 -1.94 -6.93 -9.11 - -9.29 0.78 -0.24 -3.37 -1.36 -0.78 -1.71 -1.77 -0.86 -0.41 -0.57 -2.94 -1.77 0.17 0.54 0.96 -1.52 0.73 -1.59 0.42 -1.49 1.14 0.56 0.37 1.12 1.18 1.11 0.67 -3.87 -3.98 -0.5 -3.73 0.2 -2.14 -4.65 -4.56 -4.94 -4.88 1.22 2.21 2.74 1.97 -1.71 -4.57
LOC_Os02g48870.1 (LOC_Os02g48870)
-3.8 -0.26 -9.46 -12.0 - -7.99 1.87 1.26 0.02 -2.51 -1.81 -2.65 1.3 2.41 -2.17 -1.27 -3.57 0.92 -2.39 -1.22 -4.01 -3.83 -3.26 -3.35 0.74 -3.01 -4.02 -4.11 -4.19 -3.59 -4.1 -3.67 -3.97 -5.47 -5.34 -4.86 -4.58 -4.71 -4.07 -5.22 -4.61 -4.44 -3.7 1.25 2.01 2.91 3.55 -0.47 -
LOC_Os02g51900.1 (UGT85A2)
-1.62 -1.01 -2.69 - - -5.91 -2.5 -2.57 -1.73 -3.89 -2.63 -1.09 0.61 -0.65 0.72 1.81 -2.78 0.3 - 3.25 -1.02 -0.24 -1.51 -0.46 2.01 2.3 0.91 -2.87 -0.76 -2.06 -1.4 -1.28 -3.63 -1.39 -0.17 0.42 -0.17 -0.43 -0.29 -3.7 -3.87 -2.81 -3.12 2.31 0.69 0.09 -2.41 -3.4 -
LOC_Os02g57760.1 (LOC_Os02g57760)
0.33 1.68 -2.51 -4.09 -6.32 -2.42 0.64 0.6 1.09 -3.06 -0.4 -3.84 1.38 1.7 -0.65 -0.31 0.87 1.01 1.05 0.75 -1.72 -1.57 -2.23 -1.62 1.91 -0.6 -1.82 -1.32 -1.92 -0.87 -1.2 -1.12 -1.66 -2.83 -2.45 -1.58 -2.48 -1.9 -2.19 -1.85 -2.23 -1.67 -1.71 0.65 0.51 -0.89 0.02 1.24 2.44
LOC_Os04g02410.1 (LOC_Os04g02410)
3.72 4.2 -0.1 - - - - - - - 1.32 - - 2.7 - - - - - -0.26 - - - - - 1.97 - - - - - - - - - - - - - - - - - - - 1.42 - - -
LOC_Os04g08200.1 (LOC_Os04g08200)
-0.63 0.0 -4.08 -6.87 -3.01 -2.74 -7.75 -6.74 -2.4 -5.98 -1.98 -6.13 -4.68 -1.84 -1.04 -1.04 -3.52 -4.19 1.13 -2.05 -7.76 -5.52 - -6.44 -3.24 -0.11 -1.69 - - - - - - - - - - - - - - - - -2.42 -0.73 0.9 3.62 4.29 2.78
-6.35 -3.01 -4.79 -9.82 -5.54 -3.17 -5.51 -6.44 -3.75 -6.52 2.37 2.73 -0.36 -2.72 -1.79 1.6 -5.31 -2.8 1.82 -0.78 -0.71 -1.56 -1.61 -0.96 -0.33 -6.58 -6.62 -0.18 -0.82 -0.72 -1.02 -0.58 -0.98 -0.74 -0.63 -1.47 -1.48 -1.84 -1.08 -5.65 -6.36 -4.46 -4.53 1.06 3.37 1.54 1.56 -1.33 -1.33
LOC_Os04g38530.1 (LOC_Os04g38530)
1.18 -0.25 -1.11 -10.48 - -8.23 0.93 0.46 0.34 -0.6 0.48 1.04 1.82 1.75 0.21 -1.3 -0.95 -0.21 0.17 0.9 -3.66 -3.79 -3.73 -3.2 -0.09 -2.51 -1.43 -4.63 -2.78 -4.47 -5.15 -4.83 -3.38 -5.01 -3.93 -3.49 -3.55 -4.04 -4.12 -5.43 -5.43 -4.57 -5.01 -0.18 -0.31 0.24 2.57 3.11 1.9
-3.98 -2.28 -7.2 - -10.25 -6.48 -1.73 -1.15 -2.68 -1.24 -0.54 -1.63 1.89 1.42 2.23 1.39 -3.25 2.71 0.01 1.71 -2.7 -1.23 -3.48 -1.51 -0.17 -1.75 3.44 -4.14 -4.34 -3.35 -4.37 -2.79 -3.2 -4.84 -4.57 -3.84 -3.83 -2.36 -2.92 -5.15 -4.34 -4.9 -4.88 1.12 1.33 1.46 - - -
2.53 3.12 2.33 - - - -2.41 -1.73 3.13 - 0.1 -0.45 1.12 1.83 - - 2.51 1.4 - -4.69 - - - -4.49 - - - -0.96 - - -1.46 -3.1 - - - - - - - - - - - -4.1 - -1.02 -0.66 0.69 -1.0
-7.53 0.98 - - - - -1.19 -4.77 -0.66 - -1.72 -0.06 2.44 3.0 - - 2.48 -1.11 - 1.31 -5.49 -6.29 -4.83 -4.86 -1.37 - -2.68 - - - - - - - - - - - - -3.07 - - - -1.96 3.02 3.4 1.58 - -
0.11 -0.5 -3.34 -6.65 -6.4 -1.22 2.28 0.93 0.6 -1.06 -1.18 0.98 1.19 1.43 -1.54 -0.95 1.32 1.25 -0.85 1.45 -1.46 -0.99 -1.38 -1.01 -2.91 -1.37 1.07 -1.53 -1.54 -1.93 -2.81 -2.34 -1.52 -2.49 -2.43 -1.69 -1.89 -1.51 -1.49 -3.66 -2.99 -2.32 -2.5 2.37 0.56 0.28 0.93 1.29 0.06
LOC_Os05g39220.1 (LOC_Os05g39220)
1.44 3.87 -2.51 1.81 3.24 1.58 -0.48 1.04 2.88 - 0.8 - - - - - -0.66 -2.92 - - - - - -2.48 - - 0.62 - - - - -0.18 - - - - - - - - - -1.52 - - - - - - -
LOC_Os05g48000.1 (LOC_Os05g48000)
-1.7 -0.54 -0.81 - - -0.43 -1.08 -0.53 - 0.21 0.02 -1.19 2.21 0.96 - 0.2 - 0.97 - -0.52 -3.07 -2.66 -3.66 -5.85 - -1.25 -0.54 - - - - -2.86 -1.9 - -1.87 - -2.03 - - -2.74 -3.11 -3.49 -1.26 0.69 2.91 2.17 3.52 1.82 -0.53
LOC_Os06g11830.1 (LOC_Os06g11830)
-4.63 -4.7 -0.95 -4.95 -7.65 -3.73 -0.29 -1.13 -2.7 -2.0 -1.2 -5.5 3.58 3.66 -6.76 - -1.24 1.59 - 1.53 -0.57 -5.11 -1.21 -4.89 -3.13 -7.24 -7.09 -1.8 -2.23 -1.74 -1.33 0.17 -1.51 -2.48 -0.95 -1.22 -0.83 -0.19 -0.35 -2.59 -1.69 -1.66 -1.37 2.73 -8.17 -6.29 -5.96 -5.3 -7.31
LOC_Os06g13220.1 (LOC_Os06g13220)
-1.16 -1.11 -1.55 -4.12 -7.66 -5.84 0.52 0.51 -0.91 -0.68 0.29 2.07 0.45 0.38 1.17 1.19 -1.09 -0.03 1.54 0.92 -0.52 -1.01 -0.72 -0.96 0.27 0.82 0.41 -0.07 -1.14 -0.38 -0.76 0.57 -0.58 -0.98 -1.08 -0.81 -1.34 -0.65 -0.94 -0.68 -0.64 -0.29 -0.3 1.05 1.24 0.22 -0.15 -1.43 -1.36
LOC_Os06g18820.1 (LOC_Os06g18820)
-5.8 -3.72 -7.78 -7.43 -5.91 -2.2 -1.08 -1.73 -2.78 -2.32 -0.74 0.91 -1.79 -1.67 1.99 2.12 -3.4 -0.89 -2.31 1.8 -1.2 -1.9 -1.28 -1.3 1.24 1.54 3.4 -1.87 -1.99 -1.68 -2.18 -0.55 -1.03 -2.23 -1.62 -1.31 -1.66 -1.24 -1.38 -1.17 -0.32 -1.01 -0.51 2.21 1.08 -0.25 -3.55 -4.87 -5.75
-2.25 0.62 - - -5.78 -2.46 -2.52 -2.76 -2.71 -1.09 0.99 0.35 -1.84 -1.98 -0.46 0.29 -3.73 -1.92 3.38 -0.95 -3.64 -6.9 -5.33 -5.24 4.16 -2.42 -3.34 - - -3.19 - -2.7 - - -1.84 - -1.16 -2.4 -1.65 -3.04 -4.06 -3.39 -3.49 0.76 0.86 0.64 -0.37 0.01 1.05
0.48 1.83 - -3.84 -1.45 1.62 - - 0.69 - -0.11 1.3 3.45 3.61 - - 3.12 1.84 - - - - - - - - - - - - - -3.41 - - - - - - - - - - - - - - - - -
LOC_Os06g47440.1 (LOC_Os06g47440)
-2.25 0.03 4.38 -2.06 3.65 1.03 0.01 0.61 - -2.5 -2.37 - -2.13 0.05 - - 0.42 -2.46 - -7.92 - - - - - - - - - - - -2.31 - - - - - - - - - - - - - - -0.09 1.65 1.15
LOC_Os07g15340.1 (LOC_Os07g15340)
-2.66 -1.23 -2.53 -15.68 -25.13 -2.32 -1.32 -2.94 -6.64 -1.73 0.88 -5.96 2.24 4.06 - - 0.9 0.78 - 2.43 -0.38 -30.77 -0.24 -7.13 - -20.64 -21.36 0.17 -12.99 -15.3 -1.6 -0.42 - -1.32 -2.24 0.97 -7.47 -0.21 -0.94 -0.97 -0.39 -1.62 -0.51 2.29 -23.06 -25.36 -25.56 -25.97 -26.47
LOC_Os08g04490.1 (LOC_Os08g04490)
0.29 2.36 -3.76 - - 0.15 - - 1.85 -2.64 -1.44 1.1 -0.77 -0.85 -0.23 2.75 -4.82 1.43 - 0.07 -1.57 -1.41 -1.87 -0.26 0.89 0.24 - 1.07 - 0.17 -0.67 0.01 -0.15 - - -0.4 0.17 - -0.87 0.27 1.05 0.57 1.96 -3.07 -0.73 -2.03 - - -
LOC_Os08g14460.1 (LOC_Os08g14460)
2.0 0.98 0.8 -1.62 -2.99 2.42 -0.47 -0.86 2.19 -2.26 -0.47 0.51 0.31 0.65 -1.19 -1.35 1.74 0.57 1.28 -0.94 -1.75 -1.36 -1.9 -1.59 -0.95 -0.84 -1.3 -1.41 -2.16 -1.37 -2.16 -1.51 -1.77 -2.55 -2.15 -1.75 -1.68 -1.48 -1.78 -2.89 -2.26 -2.24 -1.86 -0.8 -0.94 0.09 0.27 1.69 1.13
LOC_Os08g37345.1 (LOC_Os08g37345)
0.79 3.09 -2.43 -1.89 -0.6 -3.81 -0.76 0.0 0.28 -0.09 2.57 -3.82 1.97 2.71 -4.06 -4.05 -0.11 0.59 3.15 -0.54 -3.5 -3.29 -3.34 -3.8 -0.06 -4.47 -2.57 -3.41 - -4.11 -1.81 -2.84 -5.18 -4.82 -4.89 -2.93 -3.26 -4.03 -3.32 -4.75 -6.66 -6.4 -3.67 -0.59 -0.37 -0.59 -3.38 -2.4 -3.3
-4.33 -1.24 -2.53 -1.09 -0.61 5.01 -3.95 -3.94 -0.84 - -6.57 0.2 3.07 0.61 - - -6.53 -7.34 - -0.86 -6.86 - -2.64 -5.28 -1.86 - - - -1.11 -3.07 - -1.97 - - - - - - - - -3.9 -5.83 -5.47 0.38 - - - - -
LOC_Os09g20170.1 (LOC_Os09g20170)
- 1.16 3.86 - - -0.47 - - -0.44 - -1.2 0.12 - - - - - -4.98 - - - - - - - - - - - - - - - - - - - - - -3.98 - - - 2.21 2.8 4.05 -0.06 - -
1.04 3.09 -1.88 -0.81 -2.95 -0.63 -1.57 -1.63 1.33 -0.08 1.56 -2.67 1.02 2.14 0.07 - 2.7 1.26 - -1.02 -4.22 -5.78 - - - -1.19 -1.21 - - - - - -0.81 - - - - -1.53 - -5.38 - - - -2.6 -0.74 -0.73 -2.16 2.66 1.56
2.15 2.34 -2.04 -4.93 - -2.42 -0.4 -0.74 3.32 -5.21 -0.1 1.35 2.18 2.43 -4.74 - 3.36 1.77 - -7.15 -4.73 -5.25 -6.18 -5.81 - - - -2.33 - - - - - - -5.53 -4.3 - -5.09 - -8.26 -9.52 - - -8.57 -4.38 -3.31 - -5.42 -
LOC_Os10g26720.1 (LOC_Os10g26720)
-5.33 0.03 -4.36 -8.39 - - 1.26 1.46 0.32 -1.76 -1.48 1.53 1.25 1.7 -0.62 -2.18 -1.5 1.09 -4.31 -0.94 0.56 -2.62 -0.0 -2.99 -5.97 -2.2 -0.29 0.6 0.98 0.58 0.29 -0.42 0.13 -1.05 0.03 0.24 -0.04 -0.18 -0.17 -2.64 -2.09 -1.67 -1.28 2.06 2.04 0.42 -2.0 -3.64 -5.55
-0.54 3.51 -2.68 3.63 1.85 2.4 0.13 0.49 1.86 - -2.8 - - 1.56 - 1.68 0.15 -0.24 - -0.33 - - - - - - - - - - - - - - - - - - - - - - - -1.63 - - - - -
LOC_Os10g38120.1 (CYP704A1)
-4.6 1.48 -3.73 - - -2.68 0.41 -0.59 -1.52 -2.11 0.98 3.7 1.82 2.28 0.05 1.9 -1.94 1.48 - -0.89 0.39 -0.25 -1.25 -2.45 - - - 1.14 -0.49 -0.32 -1.99 0.15 - -1.54 -1.99 - - -1.54 -0.54 -0.9 -3.64 -2.67 -2.32 -1.24 -1.43 -3.13 -1.53 - -
-5.24 0.12 -2.69 - - - -1.9 -2.97 -5.43 -4.49 -2.41 0.75 -1.19 -0.34 -2.98 -2.36 -5.88 -0.53 -1.1 -2.32 -3.75 -3.25 -2.29 -4.22 -2.94 -5.41 -5.35 - -4.13 -1.77 -2.0 -2.25 - -3.72 - -5.11 -3.63 -4.61 - -1.78 -4.59 -1.11 -3.12 4.11 3.58 3.35 -1.25 - -
LOC_Os11g03190.1 (LOC_Os11g03190)
-2.12 0.34 -5.06 - -3.65 -0.53 1.1 1.18 -0.19 0.45 -1.24 1.02 -0.84 -1.15 2.32 1.6 -3.41 1.25 - 0.81 -0.94 0.47 -0.79 0.67 0.62 1.14 -0.87 0.19 -0.65 -2.22 -2.84 -0.78 -1.11 - -0.17 0.48 -2.19 -0.93 -0.3 -0.03 -0.27 0.83 0.27 0.11 -2.45 -0.07 -0.51 -0.77 -0.51
LOC_Os11g28450.1 (LOC_Os11g28450)
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os11g42340.1 (LOC_Os11g42340)
1.13 4.36 -0.2 - - - - -1.39 - - -1.85 - - - - - -0.04 -0.46 - 0.48 - - - - - 1.54 - - - - - - - - - 1.8 - - - -1.56 -1.86 -0.93 - -0.71 - - - 2.44 3.02
LOC_Os12g02940.1 (LOC_Os12g02940)
0.03 1.4 - -2.89 - 1.98 0.22 0.2 0.21 0.23 -0.41 -1.5 1.69 -0.06 2.47 1.76 -3.1 0.75 - -0.16 -2.06 -0.1 -0.89 -3.57 1.56 0.02 1.46 -0.67 - -0.43 - -0.27 -0.43 - - -0.7 - 0.68 -0.85 -2.28 -4.15 -2.04 -1.35 1.28 -1.1 -0.51 -0.96 - -1.07
LOC_Os12g10220.1 (LOC_Os12g10220)
- -3.22 -7.67 - - - -2.95 -2.22 - -6.29 0.24 1.49 0.59 1.29 - - -2.79 -0.63 - -2.41 -2.8 - -2.27 -8.15 - - - -2.79 -3.63 -2.33 -4.43 -2.17 -3.46 -4.64 -2.71 -2.59 -5.25 -2.8 -2.53 -3.66 -5.06 -2.71 -2.66 1.19 - - 5.08 0.24 -4.23
LOC_Os12g13810.1 (LOC_Os12g13810)
-1.63 2.57 -1.79 - - - -1.99 - - -1.23 -0.74 2.53 1.23 2.33 2.35 3.4 - 1.16 - 1.03 - - - - - - - - - - - - - - - - - - - - - - - 0.94 1.02 2.04 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.