Heatmap: Cluster_100 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Gametophyte
Male Gametophyte
Hermaphrodite Gametophyte
Gametophyte; Antheridiogen added at D-3
Sporophyte
Seedling, sporophyte
Seedling, 24h of 2\,4-D treatment
Seedling, 48h of 2\,4-D treatment
Whole plant
Whole plant, 2\,4-D Auxin
Callus
Differentiating Callus
Proliferating Callus
Bulbil
Leaf
Leaf (without leaf tip)
Leaf Tip
Root
Root (without root tip)
Root Tip
Differentiated root
Shoot Apex
Shoot
Shoot Tip
Vegetative Frond
Frond
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 32.58 34.84 0.0 0.0 13.01 1.11 0.97 1.47 6.81 2.44 0.0 43.96 0.0
13.95 18.16 18.44 14.07 20.95 27.69 26.96 32.88 33.55 30.11 31.62 66.06 66.75 5.26 50.78 16.22 21.97 11.83 17.14 25.26 26.11 13.11 8.97 24.19 15.28 14.27
Ceric.01G057700.1 (Ceric.01G057700)
12.83 3.55 3.14 1.27 1.53 0.99 0.51 1.04 5.58 8.07 0.98 0.23 0.0 0.48 100.67 2.75 1.79 0.15 0.0 0.46 0.48 0.92 1.59 1.61 2.44 0.29
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 33.49 0.0 0.0 0.0 1.11 0.97 1.47 6.81 0.0 0.0 43.96 0.0
4.16 1.65 2.25 1.19 0.14 0.39 0.25 0.55 0.94 1.45 1.01 0.0 0.07 6.25 70.85 0.85 0.1 1.17 0.27 0.45 0.14 0.74 5.35 0.11 7.2 0.18
0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.02 0.05 0.03 0.51 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 32.58 34.84 0.0 0.0 13.01 1.11 0.97 1.47 6.81 2.44 0.0 43.96 0.0
Ceric.03G100100.1 (Ceric.03G100100)
0.49 0.06 0.02 0.84 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.08 1.76 1.08 0.08 0.0 0.09 0.0 0.18 0.0 0.22 0.43 0.0 0.19 0.03
9.86 2.4 3.47 7.76 19.07 1.68 2.2 3.42 8.54 6.83 8.53 30.43 28.5 0.76 17.07 0.15 18.08 2.06 0.0 11.04 1.02 11.46 3.22 7.51 3.05 0.06
Ceric.05G043100.1 (Ceric.05G043100)
7.37 2.65 2.82 3.1 6.07 0.35 0.37 0.0 7.88 9.03 3.35 0.0 1.84 6.25 39.22 1.54 5.29 3.97 0.68 1.69 0.14 9.19 4.89 4.3 14.37 1.57
0.0 0.05 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.95 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 32.58 34.84 0.0 0.0 13.01 1.11 0.97 1.47 6.81 2.44 0.0 43.96 0.0
4.04 1.27 0.32 2.35 1.28 0.29 0.3 0.51 0.84 1.16 3.96 1.99 1.39 0.39 7.49 0.0 1.61 0.22 0.0 1.59 0.16 0.64 0.32 1.45 0.55 0.01
1.9 0.74 0.55 2.16 2.18 0.76 0.78 0.11 2.03 1.71 0.0 0.0 0.13 0.15 1.45 0.15 2.1 0.0 0.0 1.14 0.0 0.8 0.35 0.94 0.42 0.04
Ceric.06G075200.1 (Ceric.06G075200)
5.07 1.62 1.72 1.5 4.01 1.15 0.93 1.14 3.89 3.26 0.85 17.52 8.04 0.35 15.62 0.09 3.73 0.25 0.17 5.18 0.7 3.57 1.67 2.79 3.73 0.07
0.8 0.0 0.22 0.86 0.0 0.0 0.0 0.0 0.0 0.4 0.0 0.1 0.66 0.27 5.74 0.0 0.0 0.0 0.0 0.06 0.19 0.0 0.19 0.19 1.98 0.19
6.16 7.49 1.11 10.68 4.89 2.07 1.66 1.48 5.51 5.02 2.47 6.0 2.82 0.55 5.44 0.0 5.41 0.22 0.0 1.45 0.42 2.35 0.77 5.86 1.56 0.0
1.25 0.11 0.04 0.11 0.25 0.11 0.34 0.0 0.26 0.29 0.18 1.26 1.16 0.08 7.42 0.08 0.08 0.21 0.0 0.24 0.1 0.21 0.36 0.16 0.22 0.22
Ceric.08G067800.1 (Ceric.08G067800)
2.96 0.38 0.6 0.46 0.0 0.0 0.0 0.0 1.7 1.25 0.16 0.0 0.08 0.77 1.9 0.0 0.0 0.1 0.0 0.14 0.07 0.0 1.04 0.0 0.32 0.02
10.29 33.73 6.28 8.76 11.94 2.84 3.87 4.39 9.2 7.52 4.88 16.3 16.51 2.32 20.02 0.62 12.46 0.88 1.84 4.38 3.11 6.75 2.4 6.61 12.79 1.55
3.7 1.65 1.2 0.88 0.31 0.13 0.0 0.11 2.65 3.47 0.29 0.15 0.07 1.15 18.69 0.48 0.14 0.71 0.13 0.26 0.14 0.25 2.89 0.12 3.07 0.29
Ceric.09G048400.1 (Ceric.09G048400)
9.31 1.44 2.25 1.14 1.11 0.99 0.86 1.32 1.75 2.33 2.73 0.37 0.2 1.46 30.66 1.8 1.23 0.8 1.83 2.37 0.45 0.61 3.56 1.44 7.07 0.61
10.85 2.74 4.87 1.27 0.39 0.0 0.18 0.39 2.51 3.62 2.86 0.19 0.13 11.15 49.69 1.14 0.31 2.52 0.13 1.01 0.64 0.92 12.43 0.46 12.66 0.37
Ceric.10G015500.1 (Ceric.10G015500)
3.53 0.88 0.98 2.04 5.73 1.67 1.45 1.9 2.39 3.28 1.27 6.98 5.38 0.96 13.62 0.61 4.2 0.25 0.67 2.78 1.28 5.23 1.68 2.79 4.72 2.69
3.73 0.22 1.3 0.11 1.25 0.0 0.12 0.0 0.25 0.46 0.93 3.71 3.05 0.08 6.68 0.0 1.09 0.33 0.0 0.16 0.0 0.0 0.1 0.33 0.0 0.0
Ceric.12G022300.1 (Ceric.12G022300)
3.05 0.74 0.43 1.14 0.29 0.0 0.27 0.38 1.19 0.43 1.06 4.63 3.45 1.39 14.59 0.0 1.72 0.62 0.08 2.04 0.0 3.09 0.51 3.35 1.24 0.0
Ceric.12G065600.1 (Ceric.12G065600)
2.63 0.93 0.16 1.17 0.0 0.0 0.0 0.24 0.34 0.22 0.0 7.89 2.55 0.0 3.58 0.0 0.0 0.0 0.0 0.86 0.0 0.89 0.0 1.05 0.0 0.0
Ceric.14G025000.1 (Ceric.14G025000)
1.95 0.12 0.04 0.39 0.0 0.0 0.4 0.51 0.38 0.56 1.48 2.92 2.41 0.09 3.99 0.0 0.48 0.0 0.08 0.46 0.0 0.0 0.0 0.47 0.25 0.01
3.67 10.56 3.76 2.67 8.2 1.49 0.84 1.61 3.68 3.24 2.69 17.01 10.06 1.11 77.14 0.28 10.93 0.66 0.26 1.68 0.74 4.54 1.65 4.84 3.16 0.3
2.95 0.54 0.12 0.73 1.67 0.12 0.06 0.06 0.31 0.88 2.46 0.48 0.66 0.21 3.61 0.04 1.39 0.12 0.0 0.28 0.17 0.58 0.1 0.54 0.72 0.05
6.82 3.58 3.51 7.46 19.82 1.15 2.61 2.06 4.43 5.21 2.28 17.04 9.68 0.86 14.59 0.0 18.87 1.11 0.0 2.05 0.42 6.62 1.68 7.2 1.34 0.01
Ceric.19G072300.1 (Ceric.19G072300)
2.06 4.18 6.12 1.32 1.38 0.88 0.64 1.31 3.21 3.34 1.75 3.44 3.36 1.2 12.81 1.32 2.11 0.43 1.6 3.4 1.2 2.78 1.36 3.33 1.54 1.19
63.42 19.6 14.76 1.33 0.86 1.7 3.14 0.73 8.24 6.54 17.69 0.28 0.43 59.06 146.03 2.69 0.35 16.57 2.81 4.58 6.63 17.96 42.89 3.12 79.78 1.09
0.13 0.13 0.05 0.0 0.0 0.26 0.14 0.13 0.4 0.22 0.22 0.0 0.0 0.09 6.16 0.54 0.0 0.38 0.17 0.24 0.12 0.24 0.75 0.29 0.51 0.05
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Ceric.1Z190800.1 (Ceric.1Z190800)
4.5 0.16 0.15 4.22 0.74 0.09 0.0 0.18 0.41 0.9 0.46 0.62 1.9 2.13 20.79 0.44 0.74 1.43 0.59 1.94 0.94 2.43 0.79 1.86 3.27 0.02
Ceric.1Z195900.1 (Ceric.1Z195900)
0.05 0.0 0.0 0.05 0.0 0.02 0.0 0.01 0.02 0.0 0.08 0.06 0.0 0.0 0.18 0.02 0.01 0.0 0.0 0.01 0.01 0.0 0.0 0.03 0.11 0.01
Ceric.1Z220900.1 (Ceric.1Z220900)
4.09 0.23 0.35 0.79 0.54 0.08 0.0 0.32 0.06 0.06 2.78 0.37 0.65 0.93 29.62 0.11 0.3 0.7 0.37 1.61 0.36 1.93 0.84 0.76 3.73 0.02
Ceric.1Z237400.1 (Ceric.1Z237400)
4.09 0.23 0.35 0.79 0.54 0.08 0.0 0.32 0.06 0.06 2.78 0.37 0.65 0.93 29.62 0.11 0.3 0.7 0.37 1.61 0.36 1.93 0.84 0.76 3.73 0.02
Ceric.1Z237500.1 (Ceric.1Z237500)
0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.01 0.0
Ceric.1Z237600.1 (Ceric.1Z237600)
0.07 0.02 0.02 0.02 0.0 0.0 0.01 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.03 0.0
Ceric.1Z240000.1 (Ceric.1Z240000)
4.09 0.23 0.35 0.79 0.54 0.08 0.0 0.32 0.06 0.06 2.78 0.37 0.65 0.93 29.62 0.11 0.3 0.7 0.37 1.61 0.36 1.93 0.84 0.76 3.73 0.02
Ceric.1Z255000.1 (Ceric.1Z255000)
0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.01 0.0
Ceric.1Z255100.1 (Ceric.1Z255100)
0.07 0.02 0.02 0.02 0.0 0.0 0.01 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.03 0.0
Ceric.1Z262200.1 (Ceric.1Z262200)
0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.01 0.0
Ceric.1Z273600.1 (Ceric.1Z273600)
0.07 0.0 0.0 0.03 0.05 0.0 0.0 0.01 0.01 0.01 0.0 0.0 0.05 0.05 0.09 0.0 0.02 0.01 0.0 0.02 0.0 0.0 0.01 0.0 0.04 0.0
Ceric.1Z273900.1 (Ceric.1Z273900)
15.51 1.34 0.75 4.47 2.06 0.92 0.0 0.0 2.35 0.75 0.76 1.6 0.54 4.69 35.78 0.62 1.03 3.56 0.0 2.95 0.0 4.26 1.43 0.33 6.24 0.45
Ceric.1Z275500.1 (Ceric.1Z275500)
0.07 0.0 0.0 0.03 0.05 0.0 0.0 0.01 0.01 0.01 0.0 0.0 0.05 0.05 0.09 0.0 0.02 0.01 0.0 0.02 0.0 0.0 0.01 0.0 0.04 0.0
0.0 0.0 0.23 0.42 0.57 0.08 0.0 0.0 0.0 0.0 0.0 3.04 2.67 0.0 2.95 0.13 0.28 0.0 0.06 0.58 0.0 0.0 0.06 0.03 1.41 0.04
Ceric.1Z284300.1 (Ceric.1Z284300)
0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.01 0.0
Ceric.1Z308800.1 (Ceric.1Z308800)
0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.01 0.0
Ceric.1Z308900.1 (Ceric.1Z308900)
0.07 0.02 0.02 0.02 0.0 0.0 0.01 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.03 0.0
Ceric.27G025200.1 (Ceric.27G025200)
4.41 0.74 0.72 3.28 2.58 0.26 0.13 0.25 0.93 2.35 0.85 4.08 2.25 0.44 10.82 0.0 2.1 0.12 0.08 0.76 0.0 1.66 0.53 1.21 1.49 0.0
Ceric.27G026100.1 (Ceric.27G026100)
4.96 4.36 0.86 3.28 4.58 0.38 0.27 1.01 1.58 2.2 1.9 16.96 7.71 0.7 20.59 0.0 3.63 0.0 0.0 2.17 0.23 3.8 0.71 3.91 2.49 0.0
Ceric.27G029400.1 (Ceric.27G029400)
3.35 0.12 0.43 1.51 6.59 0.13 0.66 0.38 1.41 2.55 1.27 3.36 2.54 0.52 12.79 0.0 5.15 0.62 0.08 2.16 0.0 2.85 0.53 4.75 1.24 0.11
7.01 4.7 4.43 0.56 0.8 1.61 0.85 0.83 7.34 7.29 2.72 0.32 0.5 0.93 65.72 4.2 1.04 0.16 1.67 1.57 0.79 2.83 7.37 1.0 19.22 0.67
3.85 0.87 0.75 0.98 0.25 0.11 0.23 0.78 1.08 0.73 2.22 11.74 6.45 0.92 4.68 0.0 0.33 0.54 0.0 0.96 0.41 0.62 0.44 0.08 0.44 0.05
Ceric.30G057000.1 (Ceric.30G057000)
3.83 1.35 0.56 1.9 2.29 0.51 0.4 0.89 2.54 2.38 0.85 11.01 6.15 0.09 19.38 0.0 2.58 0.5 0.0 2.82 0.47 1.9 0.3 2.05 0.5 0.06
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 32.58 34.84 0.0 0.0 13.01 1.11 0.97 1.47 6.81 2.44 0.0 43.96 0.0
Ceric.35G054300.1 (Ceric.35G054300)
9.43 0.0 0.56 6.79 7.63 1.7 1.77 10.12 3.86 10.41 8.45 19.5 4.01 2.32 174.78 1.15 3.81 8.26 4.45 9.78 0.0 12.66 0.0 12.41 13.23 0.23
3.28 4.52 1.87 2.21 9.12 1.75 1.93 2.54 3.41 4.68 1.35 8.26 4.65 1.03 10.21 0.0 9.48 1.69 0.0 2.88 0.21 3.46 0.95 6.1 1.36 0.01
2.55 1.33 0.56 2.68 3.05 0.57 1.76 1.45 6.17 5.95 2.63 4.5 2.51 0.0 3.88 0.31 2.71 0.99 0.37 2.03 4.24 0.42 1.38 2.15 0.88 0.36
3.0 0.45 0.97 2.32 3.39 0.58 0.96 0.92 0.99 2.19 6.35 7.14 4.48 0.16 14.41 0.0 3.48 0.0 0.08 1.24 0.0 2.38 0.56 3.98 1.13 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 32.58 34.84 0.0 0.0 13.01 1.11 0.97 1.47 6.81 2.44 0.0 43.96 0.0
63.42 19.6 14.76 1.33 0.86 1.7 3.14 0.73 8.24 6.54 17.69 0.28 0.43 59.06 146.03 2.69 0.35 16.57 2.81 4.58 6.63 17.96 42.89 3.12 79.78 1.09

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)