Heatmap: Cluster_77 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 0.59 2.13 1.06 2.54 0.37 0.43 -0.42 -0.75 -0.13 0.09 0.38 1.34 1.28
-7.47 - - -6.15 -7.98 - -6.51 -6.37 -7.12 -7.27 -5.6 - - -0.94 1.09 -0.85 -0.03 -4.0 -5.73 -5.08 -0.47 2.6 0.07 2.28 2.1 2.21
-4.81 -5.44 -5.58 -4.43 -2.55 -1.57 -1.74 -2.58 -0.67 -1.05 -0.33 -0.56 -2.73 -0.45 -3.21 -0.8 0.12 -3.63 -3.21 -2.1 -3.58 2.43 -0.83 -0.23 3.0 2.12
-0.32 -0.24 - -0.2 -0.55 - -1.15 0.04 -0.26 -1.69 0.54 -0.92 - - - -0.95 - -1.22 -0.69 - - 1.65 -0.02 1.0 2.92 1.55
-1.16 -0.23 -0.4 -0.54 -1.05 -1.56 -1.13 -0.77 -0.63 -0.06 0.04 -0.03 -0.43 0.34 -0.29 0.68 0.3 -0.43 -0.7 -0.47 -1.1 0.76 0.29 1.21 1.25 0.97
-3.6 -4.28 -2.99 -2.31 -2.04 -2.49 -2.05 -2.91 -2.94 -1.65 -2.23 -2.28 -2.75 0.35 0.58 1.66 1.44 1.32 0.73 0.14 0.81 1.66 -1.42 -0.3 1.14 0.61
-2.32 -2.46 -2.13 -1.67 -1.4 -1.58 -1.66 -2.07 -1.85 -1.33 -1.26 -1.43 -2.36 0.64 0.81 1.6 1.07 0.76 0.17 -0.54 0.77 1.58 -1.02 0.32 1.14 0.62
-4.2 -4.83 -3.96 -4.66 -4.57 -5.11 -4.04 -3.24 -1.37 -0.48 -0.44 -0.97 -3.28 -4.12 -3.67 -4.46 -1.49 -2.49 -3.42 -1.79 -0.38 3.06 -1.95 1.17 2.68 1.99
-1.18 -1.03 -1.05 -0.82 -0.79 -1.47 -1.12 -0.81 -0.69 -0.07 0.37 0.23 -0.71 0.3 0.37 1.01 0.84 -0.3 -0.33 -0.46 0.39 0.33 0.33 0.89 0.87 0.31
-0.98 -1.27 -1.26 -0.77 -0.89 -1.58 -1.04 -1.01 -0.52 -0.14 0.23 0.05 -0.83 0.13 0.37 0.85 0.61 -0.62 -0.34 -0.48 0.4 0.88 0.33 1.06 1.0 0.56
-3.42 -2.46 -2.78 -2.43 -2.41 -2.03 -2.33 -2.71 -1.58 -1.47 -1.57 -1.39 -2.68 -0.17 1.82 1.29 1.96 -1.56 -1.27 -0.58 -0.15 1.21 -1.71 1.01 1.42 1.41
-2.96 -2.13 -2.27 -1.85 -1.5 -1.43 -1.88 -2.4 -1.36 -1.1 -0.73 -0.94 -2.19 -0.32 1.65 1.22 1.33 -1.4 -1.05 -0.61 0.48 1.27 -1.26 1.06 1.47 1.25
-2.01 -1.61 -1.39 -1.36 -1.07 -0.85 -0.77 -1.27 -0.48 -0.17 -0.18 -0.18 -1.36 -0.55 1.52 0.93 1.68 -0.9 -0.78 -0.14 -1.3 0.1 -0.81 1.05 1.13 0.91
-3.02 -2.49 -2.33 -0.9 -0.32 0.43 0.78 0.47 -0.74 -0.8 -1.29 -2.14 -3.12 -1.75 0.65 1.76 -0.57 -1.99 -1.1 -1.47 -2.6 1.71 0.36 -2.03 1.83 1.17
-5.03 -3.03 - - -3.16 -3.92 -4.96 -3.05 - -4.29 -2.41 -2.75 -5.27 -1.49 0.6 -0.53 2.66 1.43 0.83 1.03 2.02 -3.49 1.29 1.17 -0.95 -1.46
- - - - - - - - - - - - - -1.32 1.47 1.46 2.41 - -2.02 -1.99 -0.2 1.01 -2.04 1.16 1.03 2.78
0.14 -1.1 -1.69 -1.75 -2.51 -2.95 -2.03 -1.26 0.01 0.47 0.83 1.09 0.85 -6.84 -8.08 -5.58 -0.01 -4.43 -3.68 -0.15 -4.04 0.96 -1.23 0.99 2.2 1.88
-1.23 -0.91 -1.38 -1.63 -0.63 -0.35 -0.62 -0.54 -1.58 -0.01 -0.46 -0.35 -1.32 -1.09 -1.26 -1.75 -0.65 0.97 0.52 -1.06 -4.24 1.58 -0.2 0.86 2.2 1.21
-3.91 -1.66 -1.25 -0.89 -0.61 -0.63 -0.43 -0.67 -0.16 0.04 0.13 -0.14 -3.05 0.02 0.97 0.89 1.17 -0.93 -0.92 -0.59 -0.07 0.22 -0.06 1.05 1.14 0.84
-3.46 -1.7 -1.37 -1.69 -0.43 -0.75 -0.63 -0.63 -2.65 -2.12 -1.08 -2.25 -2.98 1.04 2.08 1.33 1.63 -1.15 -1.01 -2.68 -2.47 1.17 -0.81 0.44 1.24 0.43
-3.36 -1.86 -1.24 -1.67 -0.32 -0.57 -0.31 -0.4 -2.48 -2.01 -1.01 -1.89 -2.86 1.15 2.18 1.27 1.73 -1.31 -0.82 -2.17 -2.36 0.83 -0.81 0.03 0.95 0.43
-2.9 -1.47 -0.97 -0.84 -0.13 -0.12 0.32 -0.16 -0.71 -1.03 -1.0 -1.51 -2.14 0.9 2.28 0.99 1.33 -1.92 -0.85 -2.31 -2.81 0.65 -1.3 -0.03 0.96 -0.04
-1.94 -2.67 -2.75 -1.84 -1.62 -1.84 -1.75 -1.73 -1.14 -1.0 -0.65 -0.91 -0.72 -3.98 -3.99 -4.18 -1.17 -3.04 -3.18 -1.52 -7.33 2.83 -3.39 -0.66 2.86 2.3
-6.33 - - - - - - - - -6.07 - - - 0.17 1.7 1.14 2.47 0.39 0.58 -0.24 -1.23 1.07 0.16 0.37 1.75 0.93
- - - - - - - - - - - - - 0.2 1.89 0.75 2.52 0.2 -0.83 - - 0.53 0.36 -0.15 2.67 1.0
- - - - - - - - - - - - - 0.73 2.32 1.12 2.68 -2.02 0.44 -0.69 -1.67 -0.46 0.21 1.24 1.24 0.68
-0.23 -0.31 -0.22 -0.33 -0.46 -1.13 -0.79 -0.47 -0.74 0.1 0.3 0.16 -0.18 0.51 0.42 1.0 1.02 -0.89 -0.22 -0.08 -1.12 0.5 -1.21 0.29 0.33 0.49
-0.42 -0.18 -0.54 -0.61 -0.33 -1.62 -0.77 -0.51 -0.92 -0.21 0.15 0.15 -0.02 0.39 0.12 0.98 1.0 -0.81 -0.66 -0.33 -0.37 0.57 -1.07 0.55 0.9 0.66
-0.86 -0.85 -1.05 -1.03 -0.66 -1.83 -1.46 -1.04 -1.28 -0.42 -0.37 -0.28 -1.0 0.09 -0.04 0.79 0.69 -0.49 -0.53 -0.48 -0.08 1.4 0.06 0.95 1.53 0.96
-0.53 -0.11 -0.21 0.11 -0.04 -1.08 -0.83 -0.49 -0.43 -0.17 0.16 0.22 -0.24 -0.06 -0.06 0.7 0.59 -0.77 -0.69 -0.47 -1.03 0.71 -0.34 0.68 1.05 0.47
-0.22 -0.52 -0.58 -0.1 -0.2 -0.78 -0.65 -0.44 -0.5 -0.05 0.31 0.43 0.09 -0.15 -0.15 0.23 0.1 -1.46 -0.85 -0.61 -0.51 0.71 -0.37 1.12 1.16 0.64
-0.39 -0.33 -0.51 -0.24 -0.32 -1.02 -0.66 -0.61 -0.59 -0.08 0.16 0.39 -0.0 0.24 0.3 0.67 0.63 -1.16 -0.73 -0.28 -0.64 0.44 -0.51 0.63 0.99 0.67
-3.16 -2.83 -3.62 - -3.33 - -4.73 - -3.47 - -3.02 - - -0.95 1.1 -0.18 2.52 -2.11 - -5.06 0.18 -2.27 -1.26 1.26 2.23 2.79
-4.87 -1.95 -5.0 -3.05 -2.36 - -4.55 - - - -3.21 -3.9 - -1.75 0.83 -0.74 1.74 -0.92 -3.46 -5.38 0.32 -3.05 -0.63 2.35 2.14 2.8
-4.28 -2.95 -4.33 -2.93 -3.67 -4.99 -5.15 -5.18 -6.62 -4.51 -3.45 -3.84 -2.33 -0.74 1.36 -0.12 2.01 -2.33 -3.04 -4.02 -0.25 -0.31 -0.65 2.14 1.76 2.7
-0.65 -0.17 -0.19 0.02 -0.25 -1.42 -1.11 -0.57 -0.57 -0.27 -0.13 0.02 -0.37 -0.08 0.24 0.7 0.84 -0.23 -0.13 -0.06 -0.71 0.26 -0.56 0.28 1.26 0.73
-1.19 -0.39 -0.07 0.08 0.31 -0.75 -1.39 -1.13 -1.0 -0.78 -0.68 -0.7 -0.72 0.49 -0.22 1.1 0.59 -0.45 -0.67 -0.1 0.54 0.54 -0.63 0.39 1.13 0.95
-1.07 -0.33 -0.3 -0.18 -0.19 -1.07 -0.99 -0.72 -0.57 -0.24 -0.05 0.1 -0.55 -0.1 0.5 0.71 0.74 -0.42 -0.22 -0.37 -1.46 1.04 -0.87 0.39 1.29 0.66
-1.28 -0.58 -0.45 -0.38 -0.51 -1.63 -1.28 -0.92 -0.85 -0.33 -0.3 -0.33 -0.99 0.21 0.74 1.12 1.13 -0.01 0.0 -0.02 -1.9 1.07 -0.74 0.0 1.2 0.64
-0.41 -0.38 -0.63 -0.88 -0.99 -2.56 -2.35 -1.71 -1.88 -0.89 -0.56 -0.21 -0.47 1.04 0.61 1.51 1.44 -0.41 -0.38 -0.59 -1.48 1.24 -0.83 0.05 1.02 0.46
-0.18 -0.11 -0.27 -0.34 -0.64 -1.86 -1.69 -1.37 -1.37 -0.59 -0.22 0.22 0.18 1.02 0.82 1.32 1.27 -0.81 -0.46 -0.44 -2.14 0.94 -1.25 0.08 0.41 0.11
-0.99 -0.42 -0.41 -0.2 -0.63 -1.94 -1.24 -0.79 -0.96 -0.45 -0.4 -0.42 -0.79 0.15 0.18 0.93 1.03 0.17 -0.17 0.03 -0.46 0.56 -0.35 0.23 1.46 0.83
-1.47 -3.48 -3.75 -3.97 -4.41 -3.99 -2.45 -1.69 0.83 1.06 1.42 1.52 0.24 -6.12 -6.7 -5.45 0.9 -3.93 -3.33 -0.64 -6.19 1.28 -2.09 0.65 2.03 1.67
-0.74 -2.18 -2.57 -2.58 -2.53 -1.93 -0.97 -0.78 0.99 1.24 1.4 1.43 -0.16 -4.35 -5.97 -2.36 0.22 -2.34 -2.38 -0.52 -3.27 1.41 -1.23 1.17 1.36 1.16
-2.4 - - -3.17 - - - -3.13 -1.91 -1.75 -0.14 -0.24 -1.05 - - - -2.54 - - - - 2.84 -3.76 -1.6 3.26 2.45
-2.94 -6.48 -6.38 -5.59 -5.42 -6.6 -5.6 -5.01 -1.84 -1.67 -0.32 -0.24 -1.25 - - - -3.73 - - -3.84 -7.55 2.98 -3.08 -0.66 3.12 2.47
-2.35 -3.96 -4.11 -3.93 -3.97 -4.15 -3.82 -3.0 -1.35 -0.7 -0.32 -0.1 -0.87 -5.44 -5.5 -4.79 -1.06 -3.73 -3.63 -0.87 -2.96 2.37 -2.25 1.08 3.0 2.35
-0.84 -1.08 -1.55 -1.38 -0.74 -0.84 -0.13 -0.19 -0.44 -0.57 -0.6 -0.86 -0.56 0.19 1.24 0.84 1.25 0.53 0.14 0.01 0.19 -2.46 -0.16 0.75 0.74 0.26
-1.98 -1.16 -1.27 -1.37 -1.44 -1.89 -1.24 -1.2 -0.97 -0.57 -0.39 -0.5 -1.4 -0.04 1.41 0.85 1.59 -0.25 -0.17 -0.28 0.98 0.47 -0.02 0.61 0.71 0.55
-1.99 -0.89 -1.04 -1.26 -0.88 -1.66 -1.11 -0.71 -0.95 -0.33 0.25 0.04 -0.98 -0.4 0.78 0.56 1.15 -0.35 -0.94 -0.87 1.18 0.87 0.39 0.83 0.85 0.41
-1.24 -1.35 -1.44 -1.41 -1.31 -1.02 -1.03 -1.07 -0.45 -0.16 0.1 0.28 -0.57 0.02 1.51 0.55 1.16 -0.18 -0.18 -0.39 0.2 0.66 -0.83 0.87 0.58 0.35
-0.49 -1.07 -1.2 -0.79 -1.27 -1.88 -1.68 -0.63 -1.13 -1.91 -0.87 -0.78 -0.81 0.26 1.56 -0.73 0.93 -1.42 0.21 -0.12 -0.79 1.18 -0.09 0.45 1.3 1.6
-6.23 -6.64 -6.29 -7.0 -7.33 -6.71 -7.09 -6.96 -6.17 -5.03 -4.93 -4.87 -5.16 -0.5 2.07 -0.7 1.38 -1.21 -0.82 -0.51 -0.24 2.02 0.66 1.7 1.93 1.27
-6.49 -5.96 -6.24 -7.39 -5.96 -4.79 -5.57 -7.47 -5.15 -4.87 -4.41 -6.54 -6.19 -1.31 2.25 0.57 2.16 -1.12 -1.39 -1.39 1.56 0.67 -2.84 1.09 2.08 1.26
-3.69 -2.56 -2.28 -2.31 -1.95 -1.95 -2.4 -2.87 -2.49 -2.11 -2.03 -2.09 -3.03 -0.73 1.5 0.73 2.11 -0.04 -0.51 -0.18 1.64 -0.4 0.29 1.11 1.22 0.96

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.